Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2601 ATGAAAGTAACAGAATCCGAAGCGGAGGCGGAGGGGGTGACTGTAAGGGAGTGCATTGAAGTGATGTCAAGCCTCCTGAGCGAAATCCCATCCATGGAGAGCTTCAAGGGAAAGTGGTCACTCATCGGAGCCACACTGACACACCTCCAAACCCACCTCTCCGACTCCGATTTCCCCGCCTCAAACCCACTATCCCTCGACCTCCTCCGCTCTCTCTCGCAAACGCTCCACCACGCTCTCTCCCTCGCCCAACACTGCCACTCCCCCAACCCCCCTCACGGCAAGCTCAAGACACAGAGCGACCTCCACTCCCTCCTCGACACCCTCAACCGCCACCTCCACGACTCCACCATCCTCTCCCGCACCCATATCGACAACGCCGCCGCCCTCTCCACCAACCCCCGCGACTCTCTCAGATCCCAATCCAGGAACCTCATCACCCGCCTCCAAATCGGCTCACCSGACTCTCGAAACTCCGCCATGGACTCCCTGCTTTCTCTTCTCCATCAGGACGACAAGAACGTCGTCATCGCCGTCGCGCAGGGCGTGGTCCCGGTACTCGTGCGCACACTSGATCACTCCACCTCCTCTGAGTCCAAGGAAAAAGCCGTTGCCGCCATCGCCAGAATCTCAACCGTCGACACCAGCAAGCCCGTCCTCGCTGCCGAGGGCTTGCTTCTCCTCAACCATCTCCTCCGGGTACTCGATTCCGGAAGCGGGTTCGCGAAGGAGAAAGCCTGCATAGCGCTTCAGGCGCTGAGTTACTCGAAGGAGAACGCCAGGGCCATAGGCTCACGCGGCGGAATCTCGTCGCTCTTGGAGATCTGCCAAGCTGGCACCCCCGGTTCTCAAGCCTCCGCCGCCGGCGTTCTCAGGAATTTATCGCGCTTCGCCGAGATCAAGGAGAATCTCGTAGAAGAAAACGCTGTTTTCGTCCTCTTGGGTCTCGCTTCTTCCGGAACTGCGTTGGCGCAAGAGAATGCCATCGCCTGCCTCTGTGGTTTAGTCTCTGAGGACCAAAGCTTGAAGCTTTCGGTGGTTAGGGAAGGTGCGCTGGAGAGCTTGAAGAATTTCTGGGAGTCGGGTCGGAGCCCCGATGTAGCAATTGAATTTCTGGGTCAGCTGGCTTCGTGTTCGCGCGTGGCGGACGTTGTTGTCTCCGATGGGTTTGTTGTGCCGCGTGTGGTGGCTGCATTGGGGTCCGGAGTTATGGCGGTTAGAGTTGCGGCAGGTARAGCCGYATATGCTATGTGTTTGGAGAGCGCAAGAGCRAGGAAGGAGTTGGGTGAGTGCGGCGGCGTTAGCCCTCTGATAAAGATGCTGGTGGAYGGGAAGAGCACGGAGGAGAAGGAGGCGGGTGCGAAAGCATTGTCGGTGATGCTGATGCATGCAGGGAATCGGAGAGTGTTTCGGAAGGACGAGAGAGGGATAGTGAGTGCGGTTCAGYTGTTGAACCCTTCGGTGGTGGGTTTGGATAAGAGGTACCCGGTGTCGTTGCTGGAGTCGCTGGTTCATTCCAAGAAGTGTAAGAAGCAGATGGTTGCTGCTGGTGCTTGTGTTTACACTCAGAAGCTTGTGGACATGGATGTCCCTGGTTCCAAGAAGCTCTTGGAAAGCCTTGGTCGTGCCAAGATTTGGGGTGTTTTTGCTAGACCCTAA 1659 0.5726 MKVTESEAEAEGVTVRECIEVMSSLLSEIPSMESFKGKWSLIGATLTHLQTHLSDSDFPASNPLSLDLLRSLSQTLHHALSLAQHCHSPNPPHGKLKTQSDLHSLLDTLNRHLHDSTILSRTHIDNAAALSTNPRDSLRSQSRNLITRLQIGSPDSRNSAMDSLLSLLHQDDKNVVIAVAQGVVPVLVRTLDHSTSSESKEKAVAAIARISTVDTSKPVLAAEGLLLLNHLLRVLDSGSGFAKEKACIALQALSYSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFAEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLVSEDQSLKLSVVREGALESLKNFWESGRSPDVAIEFLGQLASCSRVADVVVSDGFVVPRVVAALGSGVMAVRVAAGXAXYAMCLESARARKELGECGGVSPLIKMLVDGKSTEEKEAGAKALSVMLMHAGNRRVFRKDERGIVSAVQLLNPSVVGLDKRYPVSLLESLVHSKKCKKQMVAAGACVYTQKLVDMDVPGSKKLLESLGRAKIWGVFARP* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2601 552 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 550 - -
Amo03g2601 552 SMART arm_5 256 296 IPR000225 GO:0005515
Amo03g2601 552 SMART arm_5 171 212 IPR000225 GO:0005515
Amo03g2601 552 SMART arm_5 421 462 IPR000225 GO:0005515
Amo03g2601 552 SMART arm_5 297 337 IPR000225 GO:0005515
Amo03g2601 552 Gene3D - 365 539 IPR011989 -
Amo03g2601 552 SUPERFAMILY ARM repeat 144 485 IPR016024 -
Amo03g2601 552 Gene3D - 132 364 IPR011989 -
Amo03g2601 552 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2601 Amo-Chr3 112889954 112892170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2601 138 410 U-box Gene Family AT2G23140 30.797 1.40e-17 84.3