Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2586 ATGAACTTTGTGAAGAAGTGTAAGAGGGTGTGGGGAAGCAGCGAGAGAATGTGTTGTGGTGAAGAAGAGAAGAGTGGCAGTTATGGGAGATTAAAAGAGAATAAGAAGAAGGAGAAGAGGAAGGTGAAGAAGGTGGAAACCAGTGCTCCTCCACATGGTTGTTTCTGTGTGTACGTAGGAGAAGAAAAGCAAAGGTTTGTGATGAAGATAAAGCACGCGAACCATCCGTTATTCAAGGCCTTATTGGACGCTGCTGAAACCGAATACGGTTACAGAAATGGACCACTCTGCCTCCCTTGCGACGTTGACTTGTTCTGCGAGGCACTCGCTGAGATCCAGAACACTTCTTCTTCCGTCGGTTGTGCCTTTCATCACACTAACAAACACTACTCTTCTTCTTCATCTTCTTCTTCTTCTACTTTATCCGCATCGGTTTTCCAGAGTCCATTGTCCTATCATTCTAATCTCACTGATTACCAGCTTCTCGTATAG 492 0.4492 MNFVKKCKRVWGSSERMCCGEEEKSGSYGRLKENKKKEKRKVKKVETSAPPHGCFCVYVGEEKQRFVMKIKHANHPLFKALLDAAETEYGYRNGPLCLPCDVDLFCEALAEIQNTSSSVGCAFHHTNKHYSSSSSSSSSTLSASVFQSPLSYHSNLTDYQLLV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2586 163 Pfam Auxin responsive protein 35 110 IPR003676 GO:0009733
Amo03g2586 163 Coils Coil 28 48 - -
Amo03g2586 163 PANTHER SMALL AUXIN-UP RNA-RELATED 1 135 - -
Amo03g2586 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2586 Amo-Chr3 111979044 111979892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2586 20 118 Calmodulin-binding Proteins AT4G34750 39.048 2.65e-18 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3565 13 121028253 121028980 Amo03g2586 03 111979044 111979892 hybridization