Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2502 ATGTATTCAAAGAGAGAGAACATGGAAGATGACAAAGAAGAACATGGTTATTTAGAAACCGACCCAACTGGTCGATATGGCAGGTTTGGAGAAGTTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAAGTTCTTGGGATAGAGGTAGCATGGAACCAGGTGAAGATCAACGAGGCGCTTCGAACGCCGGACGATTTGCAGCGGCTATACTCGGAGGTTCATCTTCTAAGCACCCTCAAGCACCAATCCATCATAAGATTCTATACTTCTTGGATTGATGTTGAGAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACTTCAGGATCACTAAGAGAATACCGGAAGAAATATAAGCGAGTCAGTATACGAGCGATAAAGAATTGGTCTCGGCAAATCTTAGAGGGTCTTGTTTATCTACATGGCCACGATCCGCCAGTGATCCATAGGGACCTAAAATGTGACAACATATTTGTCAATGGCCATCTTGGACAGGTGAAAATCGGAGACCTGGGACTAGCTGCGATTCTTCGCGGCTCGCAGTCGGCACACAGTGTTATAGGCACGCCAGAGTTCATGGCACCGGAATTGTACGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGAATGTGTTTGTTGGAAATGCTCACATCTGATTATCCATATTGTGAATGTACTAATCCAGCACAGATATACAAGAAAGTAACATCGGGGAAGTTACCAATGGCATTTTTCCGAATTGAAGACGGCGAAGCGCAGAGGTTCATCGGAAGATGCCTGCTACCAGCGGCGAAGAGACCATCAGCAAAAGATTTGTTGCTTGACCCTTTCTTTCTGTCTGATGATTCTTCATCATCATTAACAAAGTTTGGAATTCAGAACTATTCACTTTTGAATAGTGAGATGGAAAAGCTGCAACTGAGTGATCCTTTGCCTAGAACTGAAATGAAAATCACAGGGAAGCTGAATCCTGATGATACCATATTTCTCAAAGTGCAACTTTCTGATAAGGATGGTTCCGTGAGGAATGTATATTTTCCGTTTGATATTGTGAATGATACTCCAATGGATGTTGCGACGGAGATGGTGAAAGAACTGGAGATTGGTGATTGGGAGCCTTTTGAAATTGCGAATATGATCGATGGCGAAGTATCTGCTCTGTTACCGCGAAGGAGGGCGAGTAATCATGATGAATACGACGACGACGGAGGATCTCATCATTGTTTTCGCTCCTTCTCTTCTTGCTCCTCCTCCCAAGACTCAATGGCAAGTCTTGTTCCATTATCTGAGGCCATGCCTAATGAATATTACTGGCTCCATGATGATTTGTTTGACGACACTAGTTCACAAGGAACGTATTCCAACTTGAACTATCATTCAGCAGATGAACTTGACTATGTCTATAATAATTTAGCTTCTTCTACTAAAAATGACAAAATCCCCATCATGAAGAGTACTCACAAGTGCACAAGATTTTCCCCACAAGATTCATTTCCAACTTCATCACAACTAGCACCCTATAGTAGTAGCGTCAAGGGTAAGAGGGTGATGGAGAATGGTGGTAGCAGTAGTAGATTGACAAGGAACAGATCATTGATTGATATAAGGAGCCAAATGTTGCACAGATCATTGGTTGAGGAAGTGCACAAGAGAAGGTTGTTTAAGACTGTTGGTGCTGTTGAGAATATTGGATTTCAAGCACCTTGTAAAGTTGAGAACGACAAGAACCATTCAAGGAGTGCCAAGGGAGAAAATGTTGCCAGATAA 1788 0.4234 MYSKRENMEDDKEEHGYLETDPTGRYGRFGEVLGKGAMKTVYKAIDEVLGIEVAWNQVKINEALRTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVENKAFNFVTEMFTSGSLREYRKKYKRVSIRAIKNWSRQILEGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCLLEMLTSDYPYCECTNPAQIYKKVTSGKLPMAFFRIEDGEAQRFIGRCLLPAAKRPSAKDLLLDPFFLSDDSSSSLTKFGIQNYSLLNSEMEKLQLSDPLPRTEMKITGKLNPDDTIFLKVQLSDKDGSVRNVYFPFDIVNDTPMDVATEMVKELEIGDWEPFEIANMIDGEVSALLPRRRASNHDEYDDDGGSHHCFRSFSSCSSSQDSMASLVPLSEAMPNEYYWLHDDLFDDTSSQGTYSNLNYHSADELDYVYNNLASSTKNDKIPIMKSTHKCTRFSPQDSFPTSSQLAPYSSSVKGKRVMENGGSSSRLTRNRSLIDIRSQMLHRSLVEEVHKRRLFKTVGAVENIGFQAPCKVENDKNHSRSAKGENVAR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2502 595 SUPERFAMILY Protein kinase-like (PK-like) 28 323 IPR011009 -
Amo03g2502 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Amo03g2502 595 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2502 595 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 3 588 - -
Amo03g2502 595 MobiDBLite consensus disorder prediction 1 20 - -
Amo03g2502 595 MobiDBLite consensus disorder prediction 500 532 - -
Amo03g2502 595 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Amo03g2502 595 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2502 595 CDD STKc_WNK 25 283 - -
Amo03g2502 595 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 588 - -
Amo03g2502 595 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2502 595 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2502 Amo-Chr3 109217679 109220867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2502 17 586 MAP Kinase Kinase Kinase AT5G58350 59.585 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo03g2502 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2502 K08867 - gmx:100272203 801.586