Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2499 ATGCCGATATGGTGGGTGAAGTCTAAAGAGGTGAAGGAGAGAAAGAAGTCAAAAAGGGAAAGTATTATTGATGCAATACAGCAAAAATTTAAGAATGCTTCTGAAAAGATACGCAATGACAAATCCAAAGGATCTAGAAGACATGTTATTGGCACCAGGTCAGAGAAGCAATCCCAATCTGTTGTAGCTTCAAGAATATCATCACCCTCCTCCACATATGTGTCCCGCTGTCGAAGTTTTTCAGAATTAGAAAGGCCTCTATTTCAGCAGCTCCCACTGTCAGGGTCGCACCTTCCTGTTGTCAGTGACGCAAATTCTGGAATTTGTTTACCATCAAGAATGGAAAGAGCTAGTGGTTCTAAGCAATCTCCATATTGTCCCCTACCGGCATCTGGTGTTGTTTCCAACAGGGGATATCCTACTGATGCTGAGGGATATATAGATACCGCATCTGTTTCAAGTGATAGCTCTGGTTATAGTGGTGACTCATCTGATTCACATCTCATTAGTCCTCTGGCAACCGACTATGAAATTGGAAACAGGGCCACCATTAACAGGTCTTTCAGGTTGGTGCACAGGAACAGATCACCTGTTACTTTCCAGAATGACTTAGGAGCATCCTCAAGCCCAGCTCCTCAAATGTGCGGTGTTAAGAATCCATCTACTTCACCAAAACGGAGTCGTTTGCATTTGCCCAATCTAAAAATAGGCCGTACCTGTGGTTTATTCAGTGCTCAAGAAAGGTCAACATCAAGCCCTTCTAGAAGTCCAGTGAGAGCACTTGGCCCTGACCAGCTATTAAACTCTGCACTATGGACAGGAAAGCCTTGTCCATATGCAGCATCAGGGAATTACTCTAGTCCTGGTTCAGGCCAAAACTCAGATGTTGGGGATCTGCCAGGACAGGTAATTTTGCCTCTTAACAGGTACAGCCCTGAGTGTTCTCCTATACCTAGTCCGAGAATGACAAGCCCTGGTCCCCGTTCCAGAATACAGGGTGGTGCTGTCACACCTCTTCATCCACGAGCTGGCACCTTCCCTTTGGAAATAACTACAAGACATCCTGATGATGTTACTAAAAAAACTCATCCTTTACCGCTTCCTCCGATAACAGTCACCAGTTATTGTCTTTCTCCAAACTATTCTTCATCTACAACTCCATCAGCTCCTCGCAGTCCTGCCAGAGCAGAGATCCAAACAAGCCAAGTTTCACGCTGGAAAAAGGGGAAGTTGCTCGGAAGGGGGACATTTGGACATGTTTATCTTGGTTTTGACAGTGAAAGTGGTGAGATGTGTGCGATGAAGGAGGTAACGCTTTTTGCAGATGATGATAAATCAAGGGAATGCGCACAGCAACTTCAACAAGAAATTATGCTTCTAAGTCAGTTGCAGCATCCAAATATAGTTCGATATTATGGTTCTGAAACGGTAGAGGACAAACTTTACATATACTTGGAGTATGTCTCCGCCGGGTCTATTTACAAACTGCTTCGAGAGTATGGCCAGTTAGGTGAAAATGCCATTCGTAATTATACTCGGCAAATTCTATTAGGACTTGCGTATCTGCATGCTAAGAACACTGTCCACAGGGACATTAAGGGAGCCAATATACTAGTGGACCCTAATGGACAGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAACTGGGGAGTCTTGTCCATTTTCATTCAAAGGAAGTCCTCACTGGATGGCACCTGAGGTTGTACATAATTCAAATGATTGTAATCTTGCTGTTGATATATGGAGTCTTGGCTGCACTGTTCTGGAGATGGCTACGACAAAACCACCTTGGAGCCAGTTTGAGGGGGTGGCTGCTATATTTAAGATTTTACAGATGAAGAAACTGCCTGAAGCACCAGAACATCTATCAGAAGATGGGAAAGACTTTGTGAGGCTTTGTCTGCAAAGAAATCCCCAGGACCGCCCATCGGCTGCGCAACTTCTAGAGCATTCATTTGTCAAAAAGGCTACACTAGAAAGAACCATTCTGACTGTACATCCTTCAGAAGCATCACCAGCTATTGTAGATGAACTGAAATCTCTGGCCATTGGACCTGCAAAACATAATTTGTGCTTAGAGTCAGAAATGGGTGGTGGTACCAGTCGGCCAAGAAGGTTGAGAATCGGCTCTGCATCAAGTGATGTGCATACACCAAGGAACATGTCATGCCCCGTTTCTCCCCTTGGACAGCGGCCTTTGGGAACATTTGATGTGGCTGGAAGAGTGTCTACAGTTCCAGTAGTTAGTCCTCGTACCACATCTGGCCTATCCACACCATTCAATGATAGTGGTCGTACAATCTCGTTTCATAGAAACAAGCAGCCGATGTTCTCACATGAAGCTGCATGTCTGATGCCAAGGTCTCAGGATGGGTTTCATTATCAGGATCTTACACATGATGCCCTTCGAGTAACCATACCTTCTCGGGATGTAATAATTTCATCTGATGATGATGCTCTTGCAACCAATTATAAGAGGGTTGTCCGAAGAGAATTTTATAATGTGCCTCAAACGCCCACGAGGGATTGTGTTAGGATGAGTACTTACTTAGATTGCCGAGCCAGTACTCCCAGGCAAGGCCCGACAACACAAATGGCATGTCACCTGCACTTCAGTGACCAGAGGGGACACCGTGCATGTGAATAA 2673 0.4478 MPIWWVKSKEVKERKKSKRESIIDAIQQKFKNASEKIRNDKSKGSRRHVIGTRSEKQSQSVVASRISSPSSTYVSRCRSFSELERPLFQQLPLSGSHLPVVSDANSGICLPSRMERASGSKQSPYCPLPASGVVSNRGYPTDAEGYIDTASVSSDSSGYSGDSSDSHLISPLATDYEIGNRATINRSFRLVHRNRSPVTFQNDLGASSSPAPQMCGVKNPSTSPKRSRLHLPNLKIGRTCGLFSAQERSTSSPSRSPVRALGPDQLLNSALWTGKPCPYAASGNYSSPGSGQNSDVGDLPGQVILPLNRYSPECSPIPSPRMTSPGPRSRIQGGAVTPLHPRAGTFPLEITTRHPDDVTKKTHPLPLPPITVTSYCLSPNYSSSTTPSAPRSPARAEIQTSQVSRWKKGKLLGRGTFGHVYLGFDSESGEMCAMKEVTLFADDDKSRECAQQLQQEIMLLSQLQHPNIVRYYGSETVEDKLYIYLEYVSAGSIYKLLREYGQLGENAIRNYTRQILLGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKHITGESCPFSFKGSPHWMAPEVVHNSNDCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAIFKILQMKKLPEAPEHLSEDGKDFVRLCLQRNPQDRPSAAQLLEHSFVKKATLERTILTVHPSEASPAIVDELKSLAIGPAKHNLCLESEMGGGTSRPRRLRIGSASSDVHTPRNMSCPVSPLGQRPLGTFDVAGRVSTVPVVSPRTTSGLSTPFNDSGRTISFHRNKQPMFSHEAACLMPRSQDGFHYQDLTHDALRVTIPSRDVIISSDDDALATNYKRVVRREFYNVPQTPTRDCVRMSTYLDCRASTPRQGPTTQMACHLHFSDQRGHRACE* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2499 890 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 807 - -
Amo03g2499 890 MobiDBLite consensus disorder prediction 311 330 - -
Amo03g2499 890 MobiDBLite consensus disorder prediction 33 64 - -
Amo03g2499 890 SUPERFAMILY Protein kinase-like (PK-like) 403 691 IPR011009 -
Amo03g2499 890 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Amo03g2499 890 Coils Coil 23 43 - -
Amo03g2499 890 Pfam Protein kinase domain 407 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2499 890 SMART serkin_6 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2499 890 MobiDBLite consensus disorder prediction 33 53 - -
Amo03g2499 890 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 807 - -
Amo03g2499 890 Gene3D Transferase(Phosphotransferase) domain 1 403 688 - -
Amo03g2499 890 ProSiteProfiles Protein kinase domain profile. 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2499 890 CDD STKc_MEKK1_plant 405 662 - -
Amo03g2499 890 MobiDBLite consensus disorder prediction 203 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2499 Amo-Chr3 109100359 109104843 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2499 1 789 MAP Kinase Kinase Kinase AT1G63700 53.563 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo03g2499 Pkinase 1.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2499 K20717 - gmx:100814422 934.48