Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2494 ATGGAGAGAAGACCATCTCCTCTGGTTGACCAAACATGCACGTCGCGAATGTTCGGAATTTTTAATTTTCTTGGAGGTCATTTCAGCAGAAAATTGGTTTTCAGTGCGAGGCATTTGAGTAGAGATGGCACTGATGCAGGAAACACAAGCAACAGAAGTAGCTCAAGTGAGCTTAGTGCAGTTGATGAAATGTACCCTCACATTGGTGTAAATTCCAGAAGAAGAGATTATGGTTGTAAAAGTGTCAGTTGTGTGGAGAATGCTCAGATGGCGGCAGATCAAGGAAATAAAGTGACAAAGATGACTATTGATCCAAAATTTGTCAATAAAAACTATCTAAGCAAACAAGGTGCAGAATGTCAACCTGATCAACTCTTGGATGCTTTACAGATATTATACTCAAACAAAGAGCTTTTCCTAAAACTTCTACAAGATCCAAACTCTCTGCTGGTGAAACAGATAAGTGGTTTACAGAGTTCTCAAGTTAATAAATATCAAAACAGTAATGGAAGAAAATCTGGAAAGCCAGTTAAATCTTCCTTTGATAGACATGATTCCGGTTCAAATATTGAGCTGGAACTTCGTGACAAAATAGTGGTTCTGAAACCTACCACAAATAAGGAGAAAAATTCTGCTGCCACTAGATTTGATAGTCCATGGCTGCATTCTCATCGAAGCTTGATTCATAATCCACAAAATGCAAAGTTTTCACATTTTCCACTTTGTCATATAAAGAGGAAGTTGAGATATGTCATGAGAGCAAGGCGAAAAGAACAGAAAACTGATGGAAAGCCTGAAAATGATCCCTGTGGTTGCAAGTTCTTGCAAGATGGCAAAATATTAAAAGAATTGAAAAGTGTGGGAAATTCACTTGAGACTTCCCCTTCAATTTATGAGAAAAGGTTCAAAGATTCTGAATTGTGCATAGGAGAGGAGGATGCTTCGGTTAGCGAAAGTTGCAATAGGATGACAGGTGATGCTTCAGTCAGCCCTTCGGAGCAAAATACACTGAACATGCCTGTTAAAGATAGGAAAAGTCTGTCTGTAAGGAGAAAGGAGCATCTTCCTAACTTTGAGTCCATATCAAGCTTGCAAAGGTACTACAATCATGGTTATATCACTGAAGGGATGAGATACTTGGACAACTATCAAATGGACCATAGAACCAAGTTGGGGCTTCAAAAAGAAAGGGCAAATGGTTGTTCCATTAGATTTTTGGGACATAAAAATGCACCAAGAGATACCATTAAGACATTTAGTGATAAGTCGAAGCCTTTTGGTACTGATATTAGAACCGAAGAGAGTCTTCCTGGAGGCGATCTACATGCACAGTCTGATAATCCTAGAGATGATGGATATAATGACAGTCCAACTYTCAACTTGGATAAAAGWAATTCAACCGGAGAAATTGAGCATTTTCAAGATTCACATCCAGAGATCCAAATTCTGTCCTTTCCACCCAAAGTTGTTTCATCAAGCCCATTTTCCACTGAAAGAATAGAAGAAAGGACTGAATCTGTTGTTGAGCATTCCACATTACAACCAGATGAATATCTGGTACAAGCAGTGCACGAACAAATCGAAGATAACCATTTTGCAGAACTTGTAAGATCCTCCTTAAATGGAACAAACAATCTAGCCTCCTCCAAGGACATGTTGGACTGCTCAAGGGAAATTGTTAAGGTTTTCGGCTTGAAATGGGATGAACTCGTGATGAAGTGCGAATCAGCCGATATGCATGATCCATCCACATTTGATGAACTGAAAGGATCGATGGGTCAACTTTCTTGCAATGCAATCTTGCTTGACTGTGTCATGCAAGCATTCATGGAAGTATATCAGAATTGTGGTTTCCCATTTAACATTGCAAGGAAAAATCCACACTTCCAAGCATATTTTGCAAAGAAAATTCTTGCTCAAGAGATTGCTGAAGTGATTAAATTGCATTTTGTGCCTCATCCATCACAAATAACATTAGACCAGCTGGTTGGAAAGGACTTAGAAAGAAGTGAATCTTGGCTAAATATCCAAGTTGATATAGAACATATTGTGAAAGAAGTGGAGGAAGATGTGCTTGAAGATTTGGTATTGGAAATGGTATCTGAGATGGACATCAGAGACTTGAAAACTTTGCATGAACATCAAACAAAGCATAAAGGAAAATAA 2166 0.385 MERRPSPLVDQTCTSRMFGIFNFLGGHFSRKLVFSARHLSRDGTDAGNTSNRSSSSELSAVDEMYPHIGVNSRRRDYGCKSVSCVENAQMAADQGNKVTKMTIDPKFVNKNYLSKQGAECQPDQLLDALQILYSNKELFLKLLQDPNSLLVKQISGLQSSQVNKYQNSNGRKSGKPVKSSFDRHDSGSNIELELRDKIVVLKPTTNKEKNSAATRFDSPWLHSHRSLIHNPQNAKFSHFPLCHIKRKLRYVMRARRKEQKTDGKPENDPCGCKFLQDGKILKELKSVGNSLETSPSIYEKRFKDSELCIGEEDASVSESCNRMTGDASVSPSEQNTLNMPVKDRKSLSVRRKEHLPNFESISSLQRYYNHGYITEGMRYLDNYQMDHRTKLGLQKERANGCSIRFLGHKNAPRDTIKTFSDKSKPFGTDIRTEESLPGGDLHAQSDNPRDDGYNDSPTXNLDKXNSTGEIEHFQDSHPEIQILSFPPKVVSSSPFSTERIEERTESVVEHSTLQPDEYLVQAVHEQIEDNHFAELVRSSLNGTNNLASSKDMLDCSREIVKVFGLKWDELVMKCESADMHDPSTFDELKGSMGQLSCNAILLDCVMQAFMEVYQNCGFPFNIARKNPHFQAYFAKKILAQEIAEVIKLHFVPHPSQITLDQLVGKDLERSESWLNIQVDIEHIVKEVEEDVLEDLVLEMVSEMDIRDLKTLHEHQTKHKGK* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2494 721 MobiDBLite consensus disorder prediction 413 468 - -
Amo03g2494 721 MobiDBLite consensus disorder prediction 164 186 - -
Amo03g2494 721 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 95 703 - -
Amo03g2494 721 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 6 92 - -
Amo03g2494 721 MobiDBLite consensus disorder prediction 450 467 - -
Amo03g2494 721 MobiDBLite consensus disorder prediction 413 429 - -
Amo03g2494 721 PANTHER DUF3741 FAMILY PROTEIN 95 703 - -
Amo03g2494 721 PANTHER DUF3741 FAMILY PROTEIN 6 92 - -
Amo03g2494 721 Pfam Protein of unknown function (DUF3741) 104 148 IPR022212 -
Amo03g2494 721 Pfam Domain of unknown function (DUF4378) 558 698 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2494 Amo-Chr3 108976846 108980556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2494 559 708 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 30.921 2.91e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2494 - - adu:107479933 1413.67