Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2491 ATGGTTTGCAAATACCACGGAGTTTTGTTTATAATCTGGTGTACTTCAAAAGTTGAGGATAGCAACTATATATACACTACTTCTTGTGTTCTCAACCAACACAAATCAGTTGCATCTCCTCAAGTATTAGAACTCACATACTTCTCTCAAACAAAATCTTCAATAACAATGGCTTTTCACATTCCAAGTATTAGAAAAGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAACCTTCATTTCAGGAGTTACTAAGCCAATCAGAAGAAGAATTCGGTTATGATCACCCAACCGGCGGCCTCACTATTCCTTGCAGCGAGGATACATTCCTTAACCTCACTTGTCAATTAAGTGGGCAGTAA 435 0.3885 MVCKYHGVLFIIWCTSKVEDSNYIYTTSCVLNQHKSVASPQVLELTYFSQTKSSITMAFHIPSIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQELLSQSEEEFGYDHPTGGLTIPCSEDTFLNLTCQLSGQ* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2491 144 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 67 142 IPR003676 GO:0009733
Amo03g2491 144 Pfam Auxin responsive protein 61 140 IPR003676 GO:0009733
Amo03g2491 144 PANTHER AUXIN-INDUCED PROTEIN 10A5 67 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2491 Amo-Chr3 108859294 108860229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2491 76 134 Calmodulin-binding Proteins AT3G43120 57.627 2.42e-19 77.4