Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2398 ATGGATGAGCTTGCTTGCTTTATGGACTGGGATCTGGAATCCATTGTGAGAGGGTGCCCATCAACTGCCACCACCATCATGGAGCACGATCCAAACCCTAATTTCCTCTTTCATCAACAAGATTATGACCTACTTTTCAGTACTAGTAGTTTTCCTGAATTCTCAGAAACCACAAGGGTCCTTGATGAATTGGACGAGCTTTACAAGCCTTTCTACCCAGTTTTCCACACTCTTTCCCCTCATATTCAAAACAATATTAATGATGATAATAATAATAATAATCATCCCCTACCGTTACCAATAATCCCCAAAGAACCCGAAGATGCCATTAAACAAGACTTGCAGCAAGTTTCCACAGTTTCTAAACCTAAAAAGAGCAAGAAGAGCCTGAACAAGAGGGTGGTGAAGGAGGTTACAGCGGCGGATATTGGAGTTTGCGACGCATGGGCGTGGCGAAAATACGGACAGAAACCTATCAAGGGTTCACCATATCCACGGAGCTATTACAGGTGCAGCAGCTCCAAAGGATGCCTGGCGAGGAAACAAGTTGAAAGGAACCATCTGGATCCAACGATTTTCTTGGTTACATACACCGCTGAACACAACCATCCCTACCCTACTCGCCGCAACTCTCTCGCAGGGATTTCACGCAAGAACAACTCCTTAACAACAACAACAACTACTACTACTACTACAACTTGTTCTTCTTCTTCGAATTCCTCGTCCATGGAAGAACATAAGGGATTCAAGAAGCAGCATGGACTTCTTTGTGAAGCTGCTGAGTTTGGTGATGTTTGGTTTCCAGACACAACAGACATCGATCATGAATTTATGAGGCTTAATAATAAACTAGAACTTCAATTTCATGCTGGTGATTTCATTTCTGGTAATTATTAG 897 0.4281 MDELACFMDWDLESIVRGCPSTATTIMEHDPNPNFLFHQQDYDLLFSTSSFPEFSETTRVLDELDELYKPFYPVFHTLSPHIQNNINDDNNNNNHPLPLPIIPKEPEDAIKQDLQQVSTVSKPKKSKKSLNKRVVKEVTAADIGVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNHLDPTIFLVTYTAEHNHPYPTRRNSLAGISRKNNSLTTTTTTTTTTTCSSSSNSSSMEEHKGFKKQHGLLCEAAEFGDVWFPDTTDIDHEFMRLNNKLELQFHAGDFISGNY* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2398 298 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 246 IPR044810 GO:0003700
Amo03g2398 298 MobiDBLite consensus disorder prediction 222 241 - -
Amo03g2398 298 ProSiteProfiles WRKY domain profile. 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo03g2398 298 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 246 - -
Amo03g2398 298 SUPERFAMILY WRKY DNA-binding domain 146 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo03g2398 298 Pfam WRKY DNA -binding domain 147 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo03g2398 298 Gene3D WRKY domain 129 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo03g2398 298 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2398 Amo-Chr3 101860370 101861762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2398 9 297 WRKY Transcription Factor Family AT4G01250 39.604 3.78e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo03g2398 WRKY 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2398 K13426 - gmx:102663255 265.003