Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2371 ATGCTGATTCAATCGTCGCTGCCTCTCCCTCAATCCCCGTTCCTCCCTCAATCGGTGCTCAACCCTCACCATAACACAAGAAGGAATACTAAATGGAGGTTTCTTGAGGGTGTGAGGGTCTCTGGTGCACTGCCACCTAGAACGGTCTTGGTGCAGCAGTGTATCTGTGATAAAGGTGTGTTGGAAGTTCTATGCAACTATGTTTCATGGGGAGAATCAAGTATGATTCAAGCTGAAAGGGTGTTGAGTTGGGGGGAAGGATATTACAATAGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTATAGATGCCAGCCCTCAAATTAAGGTTGTTTTGTGTGTTGGGTTAAGTTTTCTTCAAACAAAAATGGTAGCTGTTTTTAGCATTGTTTTTTCCAATAGAATCTGA 483 0.4389 MLIQSSLPLPQSPFLPQSVLNPHHNTRRNTKWRFLEGVRVSGALPPRTVLVQQCICDKGVLEVLCNYVSWGESSMIQAERVLSWGEGYYNRDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKAIDASPQIKVVLCVGLSFLQTKMVAVFSIVFSNRI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2371 160 PANTHER TRANSCRIPTION FACTOR TT8 70 133 - -
Amo03g2371 160 PANTHER TRANSCRIPTION FACTOR EGL1 70 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2371 Amo-Chr3 99962637 99964462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2371 58 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 42.045 3.49e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2371 - - ahf:112732736 107.842