Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo03g2350 | AGATTAGGTAATTTTCTTTTCAAAAATCTTTTTCAAAAATTTTTTTCTTTTTATTTTTCCATTGGAACTGTGACATATTGGTGGAGCCATTCAATGATATCAGATCATTCATACAAATCTATCATCAAACATTGTGATTTCAAAGCACAGAACACTTCTCAAGAATGRAATGATGCTGTGAACTATGCAGTCAACAATGAATTTGGAAACATTGATCAATACAGTATCTATACTCCTACATGCCCAGCATCACAAAACAGCAKTCTTAGGCGCATAAGGCTAAAGACTACAATGTTTCATATGATTTCTGGCTATGATCCTTGTACTGAAAATTATGCAGAGAAATATTATAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGARTCTGAATTTTCTATATTGCCCATATACAAAGAGTTAATTGCAGCTGGATTGAGAATATGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTTACAGCCACAAGGTTTTCACTCAACCATCTCAACCTCACCATTAAAACTCCTTGGTATCCATGGTACTCATCAGGTGGACAGGTAGGTGGATGGACAGAGGTATATGATGGACTGACATTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCWCTGTTTCAGCCAGAGAGAGCTCACATTCTTTTCAAGTCATTTTTGGCAGGGAAGAAGCTACCAAAGTCTTGA | 771 | 0.3774 | RLGNFLFKNLFQKFFSFYFSIGTVTYWWSHSMISDHSYKSIIKHCDFKAQNTSQEXNDAVNYAVNNEFGNIDQYSIYTPTCPASQNSXLRRIRLKTTMFHMISGYDPCTENYAEKYYNLPQVQKAMHANVTNIPYKWTACSDVLLKNWKESEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTPWYPWYSSGGQVGGWTEVYDGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKKLPKS* | 257 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo03g2350 | 256 | Gene3D | - | 108 | 145 | - | - | |
Amo03g2350 | 256 | Pfam | Serine carboxypeptidase | 23 | 249 | IPR001563 | GO:0004185|GO:0006508 | |
Amo03g2350 | 256 | Gene3D | alpha/beta hydrolase | 10 | 93 | IPR029058 | - | |
Amo03g2350 | 256 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 220 | 237 | IPR033124 | GO:0004185 | |
Amo03g2350 | 256 | Gene3D | - | 155 | 250 | - | - | |
Amo03g2350 | 256 | PANTHER | SERINE CARBOXYPEPTIDASE 24 | 18 | 255 | - | - | |
Amo03g2350 | 256 | SUPERFAMILY | alpha/beta-Hydrolases | 18 | 253 | IPR029058 | - | |
Amo03g2350 | 256 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 18 | 255 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo03g2350 | Amo-Chr3 | 99146569 | 99149266 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo03g2350 | 113 | 253 | Calmodulin-binding Proteins | AT2G22960 | 28.873 | 1.73e-12 | 62.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo03g2350 | K16297 | - | aip:107641315 | 464.922 |