Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2350 AGATTAGGTAATTTTCTTTTCAAAAATCTTTTTCAAAAATTTTTTTCTTTTTATTTTTCCATTGGAACTGTGACATATTGGTGGAGCCATTCAATGATATCAGATCATTCATACAAATCTATCATCAAACATTGTGATTTCAAAGCACAGAACACTTCTCAAGAATGRAATGATGCTGTGAACTATGCAGTCAACAATGAATTTGGAAACATTGATCAATACAGTATCTATACTCCTACATGCCCAGCATCACAAAACAGCAKTCTTAGGCGCATAAGGCTAAAGACTACAATGTTTCATATGATTTCTGGCTATGATCCTTGTACTGAAAATTATGCAGAGAAATATTATAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGARTCTGAATTTTCTATATTGCCCATATACAAAGAGTTAATTGCAGCTGGATTGAGAATATGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTTACAGCCACAAGGTTTTCACTCAACCATCTCAACCTCACCATTAAAACTCCTTGGTATCCATGGTACTCATCAGGTGGACAGGTAGGTGGATGGACAGAGGTATATGATGGACTGACATTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCWCTGTTTCAGCCAGAGAGAGCTCACATTCTTTTCAAGTCATTTTTGGCAGGGAAGAAGCTACCAAAGTCTTGA 771 0.3774 RLGNFLFKNLFQKFFSFYFSIGTVTYWWSHSMISDHSYKSIIKHCDFKAQNTSQEXNDAVNYAVNNEFGNIDQYSIYTPTCPASQNSXLRRIRLKTTMFHMISGYDPCTENYAEKYYNLPQVQKAMHANVTNIPYKWTACSDVLLKNWKESEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTPWYPWYSSGGQVGGWTEVYDGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKKLPKS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2350 256 Gene3D - 108 145 - -
Amo03g2350 256 Pfam Serine carboxypeptidase 23 249 IPR001563 GO:0004185|GO:0006508
Amo03g2350 256 Gene3D alpha/beta hydrolase 10 93 IPR029058 -
Amo03g2350 256 ProSitePatterns Serine carboxypeptidases, histidine active site. 220 237 IPR033124 GO:0004185
Amo03g2350 256 Gene3D - 155 250 - -
Amo03g2350 256 PANTHER SERINE CARBOXYPEPTIDASE 24 18 255 - -
Amo03g2350 256 SUPERFAMILY alpha/beta-Hydrolases 18 253 IPR029058 -
Amo03g2350 256 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 255 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2350 Amo-Chr3 99146569 99149266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2350 113 253 Calmodulin-binding Proteins AT2G22960 28.873 1.73e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2350 K16297 - aip:107641315 464.922