Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2323 ATGGGTAATCGAGTATCTGCGACCTGTTCTTGCAGGCTTCGATGGTACAACCAGCTCTCCCTATCCGTGGAGTATCGGGCCTTCACCCCTGAAGAGGATGACACCATAATCAGAGCTCACGCTCGGTTCGGCAACAAGTGGGCCACCATAGTCCGACTCTTTTTTGGCAAAACCGACAATGCCATTAAAAACTACTGGAACTCTACCCTTAAACACAAGTGCGCCTCCATGGGCCCCATCGACGATCCTCACTTTGCGCAGCCACTCAAACGCTCCGTCAGCACCAGCGCTGTCGTACCCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGACGGTGATGGCGACGACGGAGGTGGCGGGCCGTGGCTCAACTCATCCATGCCCTTCACCACTTTGA 399 0.5564 MGNRVSATCSCRLRWYNQLSLSVEYRAFTPEEDDTIIRAHARFGNKWATIVRLFFGKTDNAIKNYWNSTLKHKCASMGPIDDPHFAQPLKRSVSTSAVVPVSTVVVRYSLPTVMATTEVAGRGSTHPCPSPL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2323 132 PANTHER MYB PROTEIN-RELATED 9 98 - -
Amo03g2323 132 SUPERFAMILY Homeodomain-like 9 75 IPR009057 -
Amo03g2323 132 CDD SANT 27 70 IPR001005 -
Amo03g2323 132 PANTHER TRANSCRIPTION FACTOR MYB73 9 98 - -
Amo03g2323 132 SMART sant 24 72 IPR001005 -
Amo03g2323 132 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Amo03g2323 132 Gene3D - 26 93 - -
Amo03g2323 132 Pfam Myb-like DNA-binding domain 27 69 IPR001005 -
Amo03g2323 132 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 74 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2323 Amo-Chr3 97341619 97342916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2323 10 99 MYB Transcription Factor Family AT4G37260 61.000 2.95e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo03g2323 Myb_DNA-binding 6.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2323 K09422 - aip:107641435 210.69