Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2317 ATGTCCTCGTTTATCGATTTTAGGGAAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGATTTGATTCGTTACAGCGGGCACAAGAGTTCTATTCTAATTATGCGAAGAAAGTTGGGTTTGTGATGAGGATTAGGAATACAAACTTTGACAAGACAAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTGCAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAATGCGGGTAAAGAGAATAACAACAGCTGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGTTGGTGACCAAATTAGAATTGAAGCACACCCACGTGTGTTTTGCCGAGCAAGCTGTGCATTACAGTGAGTACAAGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGACATACAGCCTAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGGTCATCAATGTTGGGTTACTCAGAAAAGGATGTTAGGAACTTTATAACAAGGGATTTGCGCTGTGCTGACGTAAATGAATATGTGAAGTAA 588 0.4184 MSSFIDFREKNLKTLFRKRMMLRFDSLQRAQEFYSNYAKKVGFVMRIRNTNFDKTRKELKVPINQSIHCSREGYRESRVKAAMRVKRITTAGCKARMYVMLDRHNDNWLVTKLELKHTHVCFAEQAVHYSEYKELTMHAKCVIQNNDEADIQPNKTYLALANEVGGSSMLGYSEKDVRNFITRDLRCADVNEYVK* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2317 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 132 - -
Amo03g2317 195 Pfam FAR1 DNA-binding domain 32 121 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2317 Amo-Chr3 96814259 96815019 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g2317 FAR1 3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2317 - - aip:107606714 331.643