Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2277 ATGGGGTCATGTAGCGGAACAGTGCCGGAATTCGAGACTGGAGGTGTTGAGCCAGTAGATGGCCTTAGTGAAAGTGGTGAATGGCATTGCGACACATTGGAAAGCTCGCTAGATATTGGAATGGAAGCGGAAGAGGAGGGAGAACCGTTGGAGGATCGCGATGAAGAAGATAATGGCATCTCTGAACCAGTCATGTACAGTGCCGCAGAGATATTGAAAATGGAATTCAACAACCCTGATGAGGCGTCCCGTTTCTATGAACAATATAGCCGGGCGAAGGGGGGAATAGTTCGATACACATATTTATGCAACAGAGAAGGTTTCAGAGACAAAAAATGGCTAGAGATGCAGGATCGAAAGCGAGAGCACAAGGTTGTCACGCGATGTGGGTGTTTGGCAGAGATGAGGATAAAGCCGAAAGGTGATAGCGGAATTTGGTATGTTTCACGCTTCGTAGATGACCATAACCATGATCTTCTACCTGCAAAGTTTGTGCCATACCTGCCTTCGTACCGGAAGATTTCTGATGTTGATCTAGCCCATATGGACAGCTTGAGGCAAGTTGGAATTTCTATTCCAAAAATATATGAAGATGTGCAAGGGGGGATGAGAAGATGTTCTGGAGGTTTGAAGTTGGGCCAGACCAACATATGTGTGACCTTTTTTGGAGCGACGGGCGTAGCCAGYATGATTACAAGATCTTTGGTGATGTTCTTGCCTTTGATGCYACATATGGTCGAAACAAGTACAATCTACCAYTTGTTYTGTTTTCRGGGGTCAACCARCACAACCAGACATGCGTGTTTGCCACYGCCATGGTCTCGTGRGAATCTCAAGCGTCGTATGTTTGGGTGTTGA 858 0.4604 MGSCSGTVPEFETGGVEPVDGLSESGEWHCDTLESSLDIGMEAEEEGEPLEDRDEEDNGISEPVMYSAAEILKMEFNNPDEASRFYEQYSRAKGGIVRYTYLCNREGFRDKKWLEMQDRKREHKVVTRCGCLAEMRIKPKGDSGIWYVSRFVDDHNHDLLPAKFVPYLPSYRKISDVDLAHMDSLRQVGISIPKIYEDVQGGMRRCSGGLKLGQTNICVTFFGATGVASMITRSLVMFLPLMXHMVETSTIYHLFCFXGSTXTTRHACLPXPWSRXNLKRRMFGC* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2277 285 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 168 - -
Amo03g2277 285 MobiDBLite consensus disorder prediction 1 60 - -
Amo03g2277 285 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 168 - -
Amo03g2277 285 MobiDBLite consensus disorder prediction 38 58 - -
Amo03g2277 285 Pfam FAR1 DNA-binding domain 88 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2277 Amo-Chr3 94074851 94076340 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g2277 FAR1 8.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2277 - - aip:107647209 355.91