Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2258 GCCACCTCTGCCGGTGTTCCCTACGTCGGCGCTCCTTCTGTCTCTCCTGTAAACACCTATCCCTCCTTCGGCGGTGACTCACTTTGTCTTCGCGTTGCCGTCTCCCTCTCTGAAGTCGTCGCACTGCCGTCTCTATCTCCTTCACTCGTCGCACCTCCGTCAGCCACGTTCAGCGTTCGCAGCACCGTGTCCGACGAAGAAATCAATGTAAATAGAAAACTAGCTAAGGAACTGGTTGACAAATGGAGCCGACCCATATTTAATAAGAGTACAGGGTTTGAGGACATGAGAAATGCTGAGGATGACATGATTCCTTTCAAGAGGCCAACTATTAAAAAAGATGGTGATCTTGATTTGGAATTTTCACAGCAGCATGCATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCATCCCCAGTCTAAAATTGATCCAGAAGAAGTTAGAGCGCGAGCAAAAGCTGCTGCACAAGATCAGCAGAGAATGAAGGTTTGTGCTTTACCTCGGGGTGGGAGTATTGTTTTTTTTAAAGCTTTTTATGATTCCCTAAAATTCTTTAACTCTTTGAAAATATTTCAGCCTTTCCCAGTTGAGCAAGCAAAATTCTATCACTCTCGCATATACCAGCCAATGGAACTTGAAGAAGTTCTATCAGAAGGAGATAATGAGGATGAAGTTGATGATGAAGTTGCTGATTTTGAAGAGCTAAGGAGGCTTGGTAATTTTGACAATGTGACAATTGCTGAGAAGAAATTCATGCATATGTGGAACTCGGTTGTTTTAGCTTGGCTATCTATTATTGCGCACCGCAACAAAGACAAGAAGGTAGGGAAGAAACTGATCTCTATGGCTGATGTTGTAAAAGAACACTGGACAACTTATGGAAGAAATTCTTTTCTAGATATGACTGAGGTAGCATGGTTAAGTGTAATGGTTTATTTTATAAATCAATCTCCTTCATGTAGGAATGTGAATCTGAAGGTGCCAATAAAATGGTAG 1002 0.4251 ATSAGVPYVGAPSVSPVNTYPSFGGDSLCLRVAVSLSEVVALPSLSPSLVAPPSATFSVRSTVSDEEINVNRKLAKELVDKWSRPIFNKSTGFEDMRNAEDDMIPFKRPTIKKDGDLDLEFSQQHASRPEATPLDFVIHPQSKIDPEEVRARAKAAAQDQQRMKVCALPRGGSIVFFKAFYDSLKFFNSLKIFQPFPVEQAKFYHSRIYQPMELEEVLSEGDNEDEVDDEVADFEELRRLGNFDNVTIAEKKFMHMWNSVVLAWLSIIAHRNKDKKVGKKLISMADVVKEHWTTYGRNSFLDMTEVAWLSVMVYFINQSPSCRNVNLKVPIKW* 334
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2258 333 PANTHER PROTEIN IWS1 HOMOLOG 1 63 165 - -
Amo03g2258 333 Pfam VEFS-Box of polycomb protein 200 261 IPR019135 -
Amo03g2258 333 Gene3D - 256 300 - -
Amo03g2258 333 PANTHER PROTEIN IWS1 HOMOLOG 1 63 165 IPR044204 GO:0009742|GO:0032784
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo03g2258 Amo-Chr3 92695682 92704762 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2258 202 258 C2H2 Transcription Factor Family AT2G35670 42.105 2.73e-09 56.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2258 K17498 - aip:107615569 163.31