Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2257 ATGTTGACGCTGAAGGGAGGAACAAGGCCGCCATGGGTGAGCCTAGGAGCCTCTGTGTGGGTCCAAATAGCCTCCGGGAACACGTTCACGTTCCCTCTCTACTCCCACTCGCTGAAATCGGTTCTTGGATTCAACCAGCGTCAGCTCACATTGCTCGGTGTGGCCAACGACATCGGCGAGAATGTCGGCTTGCTCCCTGGCCTCGCCTGCAACAAGTTCCCGCCTTGGGCCATCCTCCTCGTTGGTTCTCTCGCCTCCTTCCTCGGTTACGGACTCATCTGGCTCGCCCTTAGTCAAACCCTTAAATCCCTCCCTTACTTGCTGCTATGGTCTGCCCTCGTTATTGCTGCCAACAGCAGTGCATGGTTAACCACATCCGTGCTTGTAACCAACATGAGAAACTTCCCAGTTAGCAGAGGCAAGGTTTCTGGAATTCTGAAAGGCTACGGAGGGCTTAGTGCTGCAGTTTTTACTGAAATTTACAGCATAGTGCTTCATAATTCTTCCTCGCACTTCGTGTTGTTCCTTGCCATTGGTATTCTTGTTGTGTGCTGCACTATGATGTTTCTTGTTAGGCCTTGTACCCCGGCTTCTGTTGAAGATGCGACAGACAATTGGCATTTTCTATTTATCCAGTGTTCTAGTGTGGTCTTGGGTTTATATCTTCTCGCAACTACAATTTTCGGTAACATTCTTCCATTTAGTGGTACACTTTCTTATATTCTGGTGGCCGTGATGGTTCTTCTTCTGATGGCTCCACTTGCAATCCCTTTAAAGATGACGATATGTCCAAGGAGAGAATCTGATTCAGACTCACCTGATCGGCAAGTTGGATCCTCCGACTCTATCACTGGAAATGATGGAAAAACAGAACCACTGCTAGCATCTTCATCTGCTGGAACCCTTGGAAGTTTTTATGATCAAGATGATTCATCTGAGGTGGCCATGCTTCTTGCTTTGGGTGAGGGAGCTGTAAAGCAGAAGAAGAGAAAGCCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCTGTAATAAAGGCTGATTTCTGGCTACTATTTTTCGTGTTCTTTGTTGGTGTTGGCACTGGGGTTACTGTTCTGAATAATCTGGCCCAAATAGGTATTGCACAAGGTGAGGAAGATACCACAACCTTATTGTCAATTTTCAGCTTTTGTAATTTCGTTGGACGGCTTGGTGGGGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACAATCCCAAGGACAGCCTGGCTGACATTCACACAGATAATTATGCTCATTGTATACCTTCTGTTTGCCTATGCTGTCAACGGAACCCTTTATCCTGCCGTTGCCCTTCTTGGTGTCTGCTATGGTGTGCAAGTTTCTGTGATGATCCCCACAGTTTCCGAGCTTTTCGGTTTGAAGCACTTTGGTGTATTGGGTAATGTCATGTCACTAGGAAATCCACTCGGAGCATTCCTTTTCTCAGCCCTTCTTGCAGGGTATGTATATGATACCGAAACGGCAAGGCAGGAAGCTCTAGGCCTCATTGCTTCCGGTGCCTCATGTTTGGGTCCAAATTGCTTCCAGTTGACCTTTTTCGTTCTTTCGGGTGTATGTGCCGCTGGCATCATCTTGAGCATTATTCTGACTTGGAGAATCAAGCCGGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAGGCTGCCTCAAACTTCTTCAAGTCACTGA 1716 0.4685 MLTLKGGTRPPWVSLGASVWVQIASGNTFTFPLYSHSLKSVLGFNQRQLTLLGVANDIGENVGLLPGLACNKFPPWAILLVGSLASFLGYGLIWLALSQTLKSLPYLLLWSALVIAANSSAWLTTSVLVTNMRNFPVSRGKVSGILKGYGGLSAAVFTEIYSIVLHNSSSHFVLFLAIGILVVCCTMMFLVRPCTPASVEDATDNWHFLFIQCSSVVLGLYLLATTIFGNILPFSGTLSYILVAVMVLLLMAPLAIPLKMTICPRRESDSDSPDRQVGSSDSITGNDGKTEPLLASSSAGTLGSFYDQDDSSEVAMLLALGEGAVKQKKRKPKRGEDFKFTEAVIKADFWLLFFVFFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKTIPRTAWLTFTQIIMLIVYLLFAYAVNGTLYPAVALLGVCYGVQVSVMIPTVSELFGLKHFGVLGNVMSLGNPLGAFLFSALLAGYVYDTETARQEALGLIASGASCLGPNCFQLTFFVLSGVCAAGIILSIILTWRIKPVYQMLYAGGSFRLPQTSSSH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2257 571 MobiDBLite consensus disorder prediction 275 292 - -
Amo03g2257 571 SUPERFAMILY MFS general substrate transporter 222 551 IPR036259 -
Amo03g2257 571 CDD MFS_Mch1p_like 10 539 - -
Amo03g2257 571 Pfam Nodulin-like 11 258 IPR010658 -
Amo03g2257 571 Gene3D MFS general substrate transporter like domains 11 205 IPR036259 -
Amo03g2257 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 571 - -
Amo03g2257 571 SUPERFAMILY MFS general substrate transporter 16 196 IPR036259 -
Amo03g2257 571 Gene3D MFS general substrate transporter like domains 344 552 IPR036259 -
Amo03g2257 571 MobiDBLite consensus disorder prediction 266 292 - -
Amo03g2257 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2257 Amo-Chr3 92595547 92599158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2257 2 571 Nodulin-like Gene Family AT1G80530 54.196 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2257 - - gmx:100794012 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3048 13 82749454 82753249 Amo03g2257 03 92595547 92599158 hybridization
Amo01g3182 01 103741163 103743747 Amo03g2257 03 92595547 92599158 PCT
Amo03g2257 03 92595547 92599158 Amo01g3182 01 103741163 103743747 PCT