Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2231 ATGCAGACCAGCTGTATTGTGGATGAAAAATTTGTCCCAAATGTGGGAATGATTTTCAAGACCCTAGAAGAAGCTAGAAAGTTCTACAAACATTATTCCAAACTTGCTGGTTTTTCCACCAAAATCAGGAACACGACTCGGGACGGAGACAAGATTAAGAATCATCTAATTGTATCCTCTAGAGAGAGGAGGTGGAAATTACAAATATCTCCAACTTTGAAGACAAACCCTTCAACTGGGTTAAATTGTTCGGCCATAATTTATGTACACATAATGAAGGATATTGGTCTTCGGACAATTTCCAAAGTTGTTTTGAATCACTTACATCCTTGTTGTCCAGACCACACTGAGATGCTCAAACGACACAGGGAGCTTAGCATGTTTGTGCCATGTATTATTTTCGGTTCACCGCACCTTATAGTTTCGGTTTGGTTTGCAGAGCTGTACGAGGATCGGCATATATGGATTCCGGTTTACTTGGATCACCACTTTTGGGCCGGGATGAGAAGTACGCAAAGGAGCGAGAGTATGCATTCATTTTTCAACAAGTTCATCACACAAAATAGCTCCTTGAGACAATTCGTGAAGCAATACGACAATTGCCTAGCAAGCAGAAAGCAAGCAGAGAGAGAATTTGATGCTGCAGATTTTCACACTGTGATACCGTGCGCAATAAAATCAGCAATAGAGAAGTTCAGGGAAGTGCAAGCTCAATTTAGAGGTAAAGTGAATTGTATCACAAGATCAATGCATTCCACTCTAGGTTTCACAACATATAAAGTCATAGAGCAGGTTTCCAACTCCACATTCAACAAGTTTGTCGTCACCTATGACACAGTATCACGAGATGTAAAGTGCAATTGCTTGCTTTTTGAGTCTAGGGGCATATTGTGCCACCATTCCCTAAGCGTTCTAAGCTTTGAGCGAGTGGATAACGTAGCACCGAAATACATATTGGAATGCTGGAGCAAGAACATAAACAGGAGGCATAGACACATCAAGAGCATCCATATGAGCCTGTACTGGAGCAAAGAAGTAAGAGATTTGATGAATTGGTGTTTCGGTCACACAATATATGTGAATTTGCATCCGAGTCTGAAGATTTAA 1107 0.4083 MQTSCIVDEKFVPNVGMIFKTLEEARKFYKHYSKLAGFSTKIRNTTRDGDKIKNHLIVSSRERRWKLQISPTLKTNPSTGLNCSAIIYVHIMKDIGLRTISKVVLNHLHPCCPDHTEMLKRHRELSMFVPCIIFGSPHLIVSVWFAELYEDRHIWIPVYLDHHFWAGMRSTQRSESMHSFFNKFITQNSSLRQFVKQYDNCLASRKQAEREFDAADFHTVIPCAIKSAIEKFREVQAQFRGKVNCITRSMHSTLGFTTYKVIEQVSNSTFNKFVVTYDTVSRDVKCNCLLFESRGILCHHSLSVLSFERVDNVAPKYILECWSKNINRRHRHIKSIHMSLYWSKEVRDLMNWCFGHTIYVNLHPSLKI* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2231 368 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 142 335 IPR031052 GO:0006355
Amo03g2231 368 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 119 IPR031052 GO:0006355
Amo03g2231 368 ProSiteProfiles Zinc finger SWIM-type profile. 273 309 IPR007527 GO:0008270
Amo03g2231 368 Coils Coil 191 211 - -
Amo03g2231 368 PANTHER OS03G0843700 PROTEIN 142 335 - -
Amo03g2231 368 PANTHER OS03G0843700 PROTEIN 8 119 - -
Amo03g2231 368 SMART 26again6 284 311 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2231 Amo-Chr3 89459288 89461310 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g2231 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2231 - - ahf:112777958 343.969