Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2226 ATGGAGGTGTCTTTAAGTGATGGGAATGGGGAGCTCCTGGGTACCGACAACGAGGCTGATGTGGAATCYAACCCGGAGGACATGGYTGGTCAGGATGTTGCAGACGAGTTTTTGGGTGAATATGAAGATGTCGCGACATTAGATGTGGATGACATAAAGCGGATGCGGTGGGATAGTGTTGARYCTGCTTATGAGTTTTACAGGAGGCTGGGAATGTGTCATGGATTCGGCGTCAGGAAGGGTGATTCAGGCAAAGACTGTAGAGGAAATCTGATTAGATATAGGTTTTTTTGTAACAAGGAAGGGTTGAGGGATGGGAGACACAACGACCGAGTTGATAGACGGAGGGCACACAAACCTGAGACACGAACCAATTGTGAGGCTAAGCTCTCCATATACTTTGATAAGATTGAGCGTTGTTGGAAGGTGCGAAAAGTTGCGACAGAACATAATCACGACTTGACGCCCGCATCAATGGTCCATCTGATAGCCAACCATCGTGAAATGACCGATGCAGCAAAGGCTCAGATTGATGGGTTGCATGCTAGTGGCATTGCGACATCGAAGATTGTTGGATACATGGCCGGAATGGCTGGTGGGTACTCGTTGTTGGGTTTCTTGAAGAAGGATGTGTACAACTACGCCGACAGAACCCGGCGCGCTAACATATCAGATGGCGATGCGAATGCGGCTGTTGTTTATCTGGAAGGAAAGGCTGGTTCGGATCCCATGTCGGTTGCTAGATATAGTGTAACAAAAGACGCAAGGCTGGCAAATTTAATTTGGGCCGATGGAGCTAGTAGAGTTGATTATCAACATTTTGGAGATGTGCTGGCCTTCGACTCGACATATAAGAAAAACAAGTACAAAAAACCTCTTGTGATTTTTTCAGGGTCAAACAACCACAAGCAGACCACAATTTTTGGGTTTGGTCTATTATTTGACGAGAGTGTCAGTTCTTACAAGTGGATGTTAGAAAATCTGCTTGAGGTGATGTGCATGAAGAAACCGTCTGTGGTTGTGACTGACGGGGATAAGGCGATCATAAAGGCAGTRRGATKTGTTCTTCCTGATTCGACACACCGACTGTGTGCCTGGCATATTGAGAAGAATGTTACCTCAAACGTGAAAGATGCAGTTTTACGTAGCTCTTTTAGAAGGTGGTTGTATGTTGACATGGAAATAGAGGAGTTCGAGATGGAATGGGAGCGTGCGGTTGCTGAGTATGACCTATATGACAAGGAGTGGGCCACCCAAATGTATGAGAGGAGGATGATGTGGGCAAATGCATATCTGCAAGGCAAGTTTTGCGCCGGTTTCCGGACAACGTCTCGATGTGAAGGGGTTAATGCCTTTGTAAAAAAGTTCTCGAAGACAACGCACACTATACTTGAGTTGGTTCAGAATTTGGAATTGGTGGTCCGGGAGTACCGAAACAAAGATTACTACTCCACTTCAACTCGATGA 1467 0.4588 MEVSLSDGNGELLGTDNEADVESNPEDMXGQDVADEFLGEYEDVATLDVDDIKRMRWDSVEXAYEFYRRLGMCHGFGVRKGDSGKDCRGNLIRYRFFCNKEGLRDGRHNDRVDRRRAHKPETRTNCEAKLSIYFDKIERCWKVRKVATEHNHDLTPASMVHLIANHREMTDAAKAQIDGLHASGIATSKIVGYMAGMAGGYSLLGFLKKDVYNYADRTRRANISDGDANAAVVYLEGKAGSDPMSVARYSVTKDARLANLIWADGASRVDYQHFGDVLAFDSTYKKNKYKKPLVIFSGSNNHKQTTIFGFGLLFDESVSSYKWMLENLLEVMCMKKPSVVVTDGDKAIIKAVXXVLPDSTHRLCAWHIEKNVTSNVKDAVLRSSFRRWLYVDMEIEEFEMEWERAVAEYDLYDKEWATQMYERRMMWANAYLQGKFCAGFRTTSRCEGVNAFVKKFSKTTHTILELVQNLELVVREYRNKDYYSTSTR* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2226 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 478 IPR031052 GO:0006355
Amo03g2226 488 MobiDBLite consensus disorder prediction 1 30 - -
Amo03g2226 488 Pfam MULE transposase domain 277 371 IPR018289 -
Amo03g2226 488 PANTHER OS02G0262500 PROTEIN 29 478 - -
Amo03g2226 488 Pfam FAR1 DNA-binding domain 65 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2226 Amo-Chr3 88927981 88929447 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g2226 MULE 1.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2226 - - ahf:112730358 811.601