Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2203 ATGAAAAATCTCAAAACGCTTATCACAAAAAATGGTTGTTTTTCTGAATGTCCCAAATATCTTCCAAATAGTTTAAGGGTATTGGAATGGTGGAGATTTCCTTCAGAGTGGCTACCAAATGATTTTCAACCAAAGAAACTCTCCATACTCAAGTTATGGAATAATCTCTATTTGGCACACAAGTTGGATAGCTTATCCAAGAAGTTGGTGAGTTTGAAAGTTTTGAATTTTGATTACAATGATTCTTTGAAAGAAATAGCTGATGTGTCTAGTCTTCAAAGTTTAGAAGAATTTTCATTCCGAGGATGCAAAAACTTAGTTAAAGTTCACAGTTCAGTTGGGTTTCTATCTAAACTTAAAAGATTGAATGCTGAATATTGCGAGAAGCTCAGGACTTTCCCAGCAGCTATCAAATTGCCCTTACTGAAAGATTTCAGTCTATGTGGTTGCTCAAGCCTGGTCAATTTTCCAGAAATTTTAGAAGAGATGGCAAATGTAGGATGGCTTGATTTGAAAGGCACTGGCATAAAAGATTTGCCATGCTCATTTCATAATCTTTCTGGATTGCGAAATCTGGAAATTATTTGGAATGAAATGTGTAAGATACCAAGCATCATTTTTATGATGCCACAYCTATCTTCATGTTATATTGAGGGAGGAGGCAAGAAYAGGAYGGTATCATCGGAAAAGCCGGAGGAGGATGAGGAGGAGGGGCTTCAAGGAATACTCACTCACTCCCTCCCCTCGCAACATATGATGAAAGCTCTTTGTCTCAGAGACACCAATCTGTCAGATGATTTTTTTCCACTAGCTGTTGCATGGCTTCCAAATGTGAGACAATTAAGCCTAAGAGGCAATAATTTCACAGTCCTTCCTGAATGCATGCAAGAATTTTGCTTTTTATACTTGCTCAACGTCGATGATTGCAACCATCTTCAGGAAATTAGAGGGATTCCACCTTGCTTGACAAACTTCTCAGCAGTAAACTGCAAATCCTTGAGTCCTAGAGCCTCAAGAGTTTTACTCAATCAGGAATTACATGAGGGTAGATGGACAATCTTTGCAATGCCAGGTGGAAGGATTCCAAGGTGGTTTGAGAAGCGCTGCAGCGGAGCTTCAATTTCATTCTGGTTTCATGGCACTGAATTCCCTGACAATGCTCTTTTCTTTGCAATTCTACTCAAAGAGGGCCTCTCTTCCCCAGTTGAAGTACTACCCATCGTGACTGTCAATGGCAACCAGGTTTCCTGTCGATGGCGGGAGACCCCAGTGGATCAATTATTTATTTTTCATCTGTCAGAGACAATTGCTTATAATGTAGTACTACGTTTTGAAAACAAATGGAATCATGCTGAGATTTCATATGAAGCACATGACTACTATACCTATGATGAGGTCCCCACTGAGTCAATTGCAAAAGAGATTGGAATCCATCTATTGAAGCAAAAGATCAGTAGCAGTATAATTCAACATATCCGATTCACTGATCCTTACAAAATGACACAACTAATCATAATGATGATGATGGTCTCAATAGTATTGCCAAACCATAAGAAGCAGCCCTTACTCCTTGAAACATCCATTGGTTTGTGGACATTGCTGTTCCTAACACACACTCTCTTTTTTGGATAA 1632 0.3903 MKNLKTLITKNGCFSECPKYLPNSLRVLEWWRFPSEWLPNDFQPKKLSILKLWNNLYLAHKLDSLSKKLVSLKVLNFDYNDSLKEIADVSSLQSLEEFSFRGCKNLVKVHSSVGFLSKLKRLNAEYCEKLRTFPAAIKLPLLKDFSLCGCSSLVNFPEILEEMANVGWLDLKGTGIKDLPCSFHNLSGLRNLEIIWNEMCKIPSIIFMMPHLSSCYIEGGGKNRXVSSEKPEEDEEEGLQGILTHSLPSQHMMKALCLRDTNLSDDFFPLAVAWLPNVRQLSLRGNNFTVLPECMQEFCFLYLLNVDDCNHLQEIRGIPPCLTNFSAVNCKSLSPRASRVLLNQELHEGRWTIFAMPGGRIPRWFEKRCSGASISFWFHGTEFPDNALFFAILLKEGLSSPVEVLPIVTVNGNQVSCRWRETPVDQLFIFHLSETIAYNVVLRFENKWNHAEISYEAHDYYTYDEVPTESIAKEIGIHLLKQKISSSIIQHIRFTDPYKMTQLIIMMMMVSIVLPNHKKQPLLLETSIGLWTLLFLTHTLFFG* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2203 543 Gene3D Ribonuclease Inhibitor 158 341 IPR032675 -
Amo03g2203 543 Gene3D Ribonuclease Inhibitor 1 157 IPR032675 -
Amo03g2203 543 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 395 IPR044974 GO:0006952
Amo03g2203 543 PANTHER NB-ARC DOMAIN PROTEIN 1 395 - -
Amo03g2203 543 SUPERFAMILY L domain-like 2 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2203 Amo-Chr3 87460257 87463419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2203 14 219 WRKY Transcription Factor Family AT4G12020 33.488 5.72e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2203 - - aip:107644584 991.875