Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2181 ATGGCGCGGAAGTATAGATCGAGATCTGGCAATCTTGAGGTTCAGACTAAGGGAAGGCAATGGACCACACAGGGCAACGAGATTCACAGGTACGCTTTGTCGCCGAATGGGTTTGTGAAGCGAAGCTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTTGCAGGATGCAGATGATGGGATGAGCGGCGAAACCGTGCCGGTAGAGGAAGTAGAAGCGATGGATTCGTCCGCCGCAGATGCAGACATAGATGCAGAAGCAGCAGTGAGGATTGTTGACGGGATAGGGTCCTTTGGCGCAATTGAATTTTCTTCCCTGACAGCCAAGAACGTTCTTACGACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATACGGTCGCATCAAGGGATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGGGGCAGAGGGCGAAATCATTTGGCAGATATTCTTGTGCTTGAGGGAAGGAGAGCGAGATGGGAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCTGGATTAAGGTCCACATTGATGATGCCAGTGGGCAATGGTTTGTTGAACAATTCTGCGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGTTGCAGTCACACAGAGCAGTCAAGGAAGGTGATTTGCACCAAATCAATTCCATGAAAAAATCTGGGTTGCGGGTGCTGACGATTTTCCGCGCCTTTGCCAATCAGTTAGGGGGATTCGAGACTGTTGGGTTCGAGATAAAGGACATATATAATGCGATAAAGAAGTAA 846 0.5 MARKYRSRSGNLEVQTKGRQWTTQGNEIHRYALSPNGFVKRSYEFSSNFDRVHALQDADDGMSGETVPVEEVEAMDSSAADADIDAEAAVRIVDGIGSFGAIEFSSLTAKNVLTTEFTSLQAAYDYYNEYGRIKGFSVRRSKVGRRTKQGAEGEIIWQIFLCLREGERDGKHMQREDRKMDPRPITRCGCEAWIKVHIDDASGQWFVEQFCDNHNHPMLDARFRGLLQSHRAVKEGDLHQINSMKKSGLRVLTIFRAFANQLGGFETVGFEIKDIYNAIKK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2181 281 Pfam FAR1 DNA-binding domain 125 219 IPR004330 -
Amo03g2181 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 71 234 - -
Amo03g2181 281 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 71 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2181 Amo-Chr3 85405384 85406660 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g2181 FAR1 1.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2181 - - aip:107633138 436.802