Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2111 ATGCCACTAAAGAGATGTAAATCGCTCTACAACTTGTTGTTGGAAGTATCTCTCCTTGTGATTAGCTACTTTGGTTCCACTAAAGAGATCTTCTCCACCACCGCACTGCCGCCGTCCGTCGCTCTCAGGCACTACCATCGTCGTCGTCTGGTCGTCGGTGCTTCTTTCGCCTTCAGGAATCACAGCTTCTTCTTCCTCGAGCTCGGCGCGTCAGTTCTAGTATTCATCTGCTCCATCGCGCTCCTGCCGCCGTCCGTCGGGCGCTCAGTCACCATCGTCTTCGTCTGGTCGTTGAAGATTCTTCCAACCCACCACCGTCTTCTGAGTTGTGTTCGTCGCCTGGCCTCTGTCTCCTTTCCTTCATTCGAGTCCAGAGAGCAGAAGCTCAACCAAGAAAAAAACCTTAGACTTCAACGAATATTAGTCCAATTCATTTTCTTTAAAATAGATTGTGAGAAGGGAAAGCTGCTAGATTGGCCAAAGCGTTTTCGTATTATCAATGGGATTGCCAAGAGAGATCTCAAGGCTGGAAATGTTTTGTTAGATGATGAATTGGATCCTAAAATTTTGGACTTTGGACGAGCAAGAAGCTTTTTAGGAGATGAAAGCGAAGCAAATACAAGACATATTGTTGGAACTTATGGCTATCTATCACCAGAGTACATAGTTGGTGGGTTGTACTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATAGTTAGTGGCAAGTGCTTAGAAATAGTTGATGCATCGATCAGAGACTCAATTAATTTGCCAGAAGTCATAAGAACAATTCATTTCGGTTTACTATGTGTGCAACAAAATCCAGAAGATCGACCAAGCATGTCATATGTGCTTATGATCATATGGTTGAAAATCCCAGCCAAAGAAGCCAGGGTTCTTTATTGA 921 0.4365 MPLKRCKSLYNLLLEVSLLVISYFGSTKEIFSTTALPPSVALRHYHRRRLVVGASFAFRNHSFFFLELGASVLVFICSIALLPPSVGRSVTIVFVWSLKILPTHHRLLSCVRRLASVSFPSFESREQKLNQEKNLRLQRILVQFIFFKIDCEKGKLLDWPKRFRIINGIAKRDLKAGNVLLDDELDPKILDFGRARSFLGDESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIVSGKCLEIVDASIRDSINLPEVIRTIHFGLLCVQQNPEDRPSMSYVLMIIWLKIPAKEARVLY* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2111 306 Gene3D Transferase(Phosphotransferase) domain 1 142 300 - -
Amo03g2111 306 ProSiteProfiles Protein kinase domain profile. 1 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2111 306 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 246 294 - -
Amo03g2111 306 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 142 247 - -
Amo03g2111 306 SMART serkin_6 63 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2111 306 SUPERFAMILY Protein kinase-like (PK-like) 153 295 IPR011009 -
Amo03g2111 306 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 246 294 - -
Amo03g2111 306 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 142 247 - -
Amo03g2111 306 Pfam Protein kinase domain 167 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2111 Amo-Chr3 78669766 78672015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2111 136 300 Receptor kinase-like Gene Family AT3G45860 44.091 3.92e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo03g2111 Pkinase 4.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2111 - - aip:110267275 234.187