Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2110 TTGAGGCTTCAAGTTCTTTCACTGTGCTGTGCTGGATCTAAGGCTATCAATGATCCAAAAGGGCATGAGAGTCATGGAGTTCATCTCTGTCACAAATGTGGATGGCCTTTCTCGAATCCACATCCAAGTGCCAAGCACAGGCGTGCTCACAAGATGATCTGTGGAACCATTGAAGGTTACAAGCTATGTTCCTCCGAGGAACAATCTTGCTCAAACGGCTCAGATGATGGACATGGTTCTGATAATGATAAAAAATCCCCAGGTCCAGAGGTCTTGAATATAGGCAACAAGGAGAAGGGTGATAGTGGGATTGGAGATAAAATAAATAGATCAGAAGATGAGGAAGGTAGTTTGGACTCAAGTACCAGTATGGAATGGGACGGCAAAGATGATCCAAAATTTTTAGGGTCTTCCAAGGACAGTGATTTTAATGATTCCAAAGTGATCTCACAATTCAAAAGTTCAATTTTCATGTGCTCTAGGCATATGGAGGCTGTGGTGTGA 504 0.4286 LRLQVLSLCCAGSKAINDPKGHESHGVHLCHKCGWPFSNPHPSAKHRRAHKMICGTIEGYKLCSSEEQSCSNGSDDGHGSDNDKKSPGPEVLNIGNKEKGDSGIGDKINRSEDEEGSLDSSTSMEWDGKDDPKFLGSSKDSDFNDSKVISQFKSSIFMCSRHMEAVV* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2110 167 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 18 118 - -
Amo03g2110 167 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 18 118 - -
Amo03g2110 167 MobiDBLite consensus disorder prediction 100 117 - -
Amo03g2110 167 MobiDBLite consensus disorder prediction 66 145 - -
Amo03g2110 167 MobiDBLite consensus disorder prediction 124 140 - -
Amo03g2110 167 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2110 Amo-Chr3 78667044 78669018 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo03g2110 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2110 - - aip:107644337 255.758