Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2089 ATGGCATTTGATCAAACCTCTGTTCCCTGCGATCTAAGATCACTAAATGTTACTCGAGCTGTCGCCGAAGAGCCACTCGTTCCTCCTGCTAGTAAACCGCTTCAAACTGCAGAATATTTCCCTCCAAATTCGGTTTGGGACCATGTTAGCTCTGGTGCGGTGCCGCTTGTCTACCCTGCGTCTGTCTCTGATGCTGGTTTGGTTAGAATAGCGTACGGAAATGTAACTTCGGCTATTGCTTCTCCTACCTGGTGTGTTCGTCCTGCTGTTCCGGTTCACCCCACTGTAAACCCCGCTGTTGGGCTTAATTATGGTTCAGGTTTTACCAATCGGTTCATGAGAGCCAATGCCGTTGATCTTTCGGGTAGTGTGGTTGTGGCTTCCCATGGATATCCTATTAATTTGGGAAATTCGGTTTCTGGTAATGGCTTTGATAATGCCCTTCCTGGCAGCAGCAGGGTGGTTGGAAATGCTGTTCATCAGATAGGTGGTGCTGTTGTACCAGGCGGGATTGGTTTTGGTTCCTCTCTCAGAACTGATCAAGGCAGTAACGAGGGCATGAATGACTCAGTATCTGGACAAAAAATGAAGCTATTGTGCAGCTATGGTGGTAAGATTTTGCCTAGACCCTGTGATGGAAAATTGAGGTATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAGAGGCACGAGCTTCAATGAATTGGCACAAAAGATGACTGATACGTATGGGCAGCCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGGTTTCGGTTTCCTGCCCTGAGGATCTTGATAATATGATGGAGGAGTATGAAAAATTGATTGAAAGGTCTCCTGATGGCTCTGCTAAATTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTGTGGTGCAGTTTGTAGACTTACAGGATAATGGGCAAAAATACGTTGAAGCTGTGAATGGAATAATAGATGGGATTAGTGGTAAACTGACAAGGAAAGAGAGTATTACAAGTGCAGCTTCCACCCAGAATTCTGATTTGAGTGTGATAGAAGCTCTTGATGGCTCGATTGCTGGTCAAGCCGATGTCAGTCAAGTGCCTTCATCTGGCATGCCTGCGGGAAATGGAACTGCTTCTCAGGATTCTACTTCAAACATGAAGGTTCCTGAAAGCATTGCATCAGTTTACTCAGATGCTTTTGTGATTCCATTGGGCACTTCTGCAACTAATTCTGGTCCAATGCACAATCCACCTTTTCATAATGAGGTCGAATTAGAAAAGTCTGTGCCTGTTACTTTATGCCAGGAGGAATTTGGGTTGCAGCATCCTGTTAAGGAAGCTCCACCACCTGCACCTAATTTGCAAGCTTCGGACATTACTGCAACTAACTCTGGTCCAAATCACCGACAACCTTTCCATAATGAGTTGCAGTTTGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCATATTGGGTTGCAGCAACCTGGAATGGAAAATCCTCTGCCTGCACTTTATATGCACCCTCTGATTGATCCTTTCCCAGAAGTTATGAACAATGCAGATTTTGTTCGGCTGCCTCGTCAGATGGGGTTCTCAAATCCTGAGCTTTTCAGCAAGGCTGGGTCCATATACTCCCAGCATCAATTACATGAAAATACTCATGGTCTTGTGACCCATCAAGTAGTCCCTGCTGTGCAAATGACAATGGCTCAGTCATCTTCTCATGCAGGTGTACAATCAAATGCTATTCAACCACAACTATTGCTGCAGATGCAGCAAAATGTCTTGGATAAACATAGTGATGGAAATACGTCAGGTAGTTACAGCTGGGTTCAGGCTCCTCCACCAGAGCATGTTGTTTTCCCTAATGTATTATTACCCCAACAAACATTAGTGAATCCCGAAAAAACCCAAAGATCAGCGGATTGTTATATGTGTCAGAAAAAGCTACCCTATGCACATTCACATAATATTTGTGCAGGTCTGGCTCCTGATTCAAACCCAAGTTACCATAGTCTCCCTATGAATGACAATTCAAAAGCGCAGGCAACAAATAAAGTTGTAGTAACTACAGCAACACCAGAAGGCATGGTTGAGCAAGTAGTTGGGACCAGACCCATGATTGTTGGCAAGTCTGAGCTTGGAGCAATGCATTATAAAGAAGCAACTGTGCTGTCCTGTAATCTTGGGTCAGAGCCTGAAGGTGAGAGGCATTTCTCACAGAAGCCAGACAATTTGGATCACCAGAATACAATTGTCAAGGGAACAATTGTAGGAGCTGGTGAAAAACAGTTACTAAATGCTGGTCGCACAGGAACAGCACCACTGCCTTATCTAGATGATGTTGTCTGCCAACATGTGATTCCAGTAGAAAACTGGGCTAAAGAAGATGTAATTGTTAATAAACCTATTACTGCTGATATGCCTTTAGTTGGTTGCGCATCTGTTGAAACTTCTCAGTGTACAGTTCAAGAATCTGCAAAAGGTTATACCAATGAACTCACTAGCATTGTTTCAAAAGCAGATATTGTGGAGAATTGGATTGCAAAGGACCATCTCAAACCTGTTGATTTAAGGGTGGAACCCCTCAAGATAATCAATCCTGAAAGTTATGCAGACAAACCTGAAGTTCATGCAAGTTATGATAAAGTAGATCACAGTACTCAGTGTTCTGTAGAGAAGAAAGGGGCTTTGGATAACAACCTTAGTAGATCAAAGTTGGATGTCGACGCAAATCAAATTAATACGATGGATGTACTTCCTAGTTTTATTATGGAAGTTCCGTACGGTAATAATTCCAGGCCAGCAGATTATAATGAGGGTGATGTATTCTCATCTTCGACTTCACCATCTGTCAGGTTTGGAGATGCACAGGATTCTTCAAACTCACTTTTTAGCAATCAGGATCCATGGAATATACACGGCTCGTACTTTCCACCACCTAGACCTAAAAAAATTGCATTAGAGAAAGAACATTATTCTTATAAGGACCAGTTTGGTGAGAATCCAGGCAACAGTGCTGAACAGAATGTAGCAGCTCCATTGGATAATGGCCTGGCATTCAAACAGAATTTAACTTTGGAAGATGCTCGATCTGCCAAGGGATCATCCCAGGACCAACAGCTTCAAGCAGTTGCTGAAGGCGTAGCTGCTTCTGTTCTGCACTCGAGCATTCCTTCAAATCCTGAATTGCATGCCAGAGATGTTTCCTTTCGTGGAGAGACAGAAGATGGATATGTTCAAAATAGTGAAATAGATGTACAGTGTAAAAGTACAGCACAGGATGTAGAGAGCAAGCTTCCAGAGAAGGCAAATTTTGGTTTTCCAATTACAGATCTTGGAGCATTGCAGGTTATAAAGAATTGTGACCTTGAAGAGCTGGTAGAATTGGGCTCTGGGACCTTTGGTACTGTATATCATGGAAAATGGAGGGGCACGGATGTTGCAATAAAGCGGATTAATGATCGGTGTTTCGCTGGAAAGCCTTCAGAGGAAGAGCGTTTGAGAGCTGACTTTTGGAATGAAGCAATCAAGCTAGCTGACTTGCACCATCCAAATGTGGTAGCTTTTTATGGTGTTGTGCTTGATGGTCCAGGAGGTTCTGTTGCTACAGTAACTGAGTATATGGTTAATGGCTCTCTTAGAAATGCCTTGCAGAAGAATGAGAGGAATCTTGACAAGCGCAAACGTCTTTTGATTGCTATGGACGTAGCTTTTGGTATGGAATACCTACACGGGAAAAACATAGTACACTTCGACTTGAAAAGTGACAACTTACTTGTGAATCTGCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACCTTGGTCTATCAAAAGTGAAATGTCAGACCCTGATATCTGGGGGTGTGAGAGGAACTCTACCCTGGATGGCCCCAGAACTCTTGAATGGAAGTAGCAGCCTTGTCTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCCTGTGGGAACTTCTCACTGGAGAAGAGCCATATGCTGACTTGCACTATGGAGCTATCATAGGGGGTATTGTGAGCAACACTTTAAGGCCTCCAGTTCCAGAAACCTGTGATCCGGAATGGCGATTACTGATGGAGCGGTGCTGGTCATCTGAGACATCAGAAAGACCAACCTTCACTGAGGTCGCCAATGAATTACGCCAGATGGCAGCCAAGGTCTCCCCCAAAGGACAAAATCAATAG 4224 0.4384 MAFDQTSVPCDLRSLNVTRAVAEEPLVPPASKPLQTAEYFPPNSVWDHVSSGAVPLVYPASVSDAGLVRIAYGNVTSAIASPTWCVRPAVPVHPTVNPAVGLNYGSGFTNRFMRANAVDLSGSVVVASHGYPINLGNSVSGNGFDNALPGSSRVVGNAVHQIGGAVVPGGIGFGSSLRTDQGSNEGMNDSVSGQKMKLLCSYGGKILPRPCDGKLRYVGGQTRIISVRRGTSFNELAQKMTDTYGQPVVIKYQLPDEDLDALVSVSCPEDLDNMMEEYEKLIERSPDGSAKLRVFLFSASELDPSGVVQFVDLQDNGQKYVEAVNGIIDGISGKLTRKESITSAASTQNSDLSVIEALDGSIAGQADVSQVPSSGMPAGNGTASQDSTSNMKVPESIASVYSDAFVIPLGTSATNSGPMHNPPFHNEVELEKSVPVTLCQEEFGLQHPVKEAPPPAPNLQASDITATNSGPNHRQPFHNELQFEKSVPVTLSQQHIGLQQPGMENPLPALYMHPLIDPFPEVMNNADFVRLPRQMGFSNPELFSKAGSIYSQHQLHENTHGLVTHQVVPAVQMTMAQSSSHAGVQSNAIQPQLLLQMQQNVLDKHSDGNTSGSYSWVQAPPPEHVVFPNVLLPQQTLVNPEKTQRSADCYMCQKKLPYAHSHNICAGLAPDSNPSYHSLPMNDNSKAQATNKVVVTTATPEGMVEQVVGTRPMIVGKSELGAMHYKEATVLSCNLGSEPEGERHFSQKPDNLDHQNTIVKGTIVGAGEKQLLNAGRTGTAPLPYLDDVVCQHVIPVENWAKEDVIVNKPITADMPLVGCASVETSQCTVQESAKGYTNELTSIVSKADIVENWIAKDHLKPVDLRVEPLKIINPESYADKPEVHASYDKVDHSTQCSVEKKGALDNNLSRSKLDVDANQINTMDVLPSFIMEVPYGNNSRPADYNEGDVFSSSTSPSVRFGDAQDSSNSLFSNQDPWNIHGSYFPPPRPKKIALEKEHYSYKDQFGENPGNSAEQNVAAPLDNGLAFKQNLTLEDARSAKGSSQDQQLQAVAEGVAASVLHSSIPSNPELHARDVSFRGETEDGYVQNSEIDVQCKSTAQDVESKLPEKANFGFPITDLGALQVIKNCDLEELVELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEEERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPETCDPEWRLLMERCWSSETSERPTFTEVANELRQMAAKVSPKGQNQ* 1408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2089 1407 ProSiteProfiles Protein kinase domain profile. 1130 1397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2089 1407 Gene3D - 214 299 - -
Amo03g2089 1407 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 159 906 - -
Amo03g2089 1407 SUPERFAMILY CAD & PB1 domains 212 301 - -
Amo03g2089 1407 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 930 1400 - -
Amo03g2089 1407 Pfam PB1 domain 212 298 IPR000270 GO:0005515
Amo03g2089 1407 SMART serkin_6 1130 1396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g2089 1407 MobiDBLite consensus disorder prediction 367 391 - -
Amo03g2089 1407 ProSitePatterns Protein kinases ATP-binding region signature. 1136 1167 IPR017441 GO:0005524
Amo03g2089 1407 Gene3D Phosphorylase Kinase; domain 1 1123 1217 - -
Amo03g2089 1407 SMART PB1_new 210 299 IPR000270 GO:0005515
Amo03g2089 1407 Pfam Protein tyrosine and serine/threonine kinase 1134 1393 IPR001245 GO:0004672|GO:0006468
Amo03g2089 1407 Gene3D Transferase(Phosphotransferase) domain 1 1218 1407 - -
Amo03g2089 1407 PRINTS Tyrosine kinase catalytic domain signature 1364 1386 IPR001245 GO:0004672|GO:0006468
Amo03g2089 1407 PRINTS Tyrosine kinase catalytic domain signature 1320 1342 IPR001245 GO:0004672|GO:0006468
Amo03g2089 1407 PRINTS Tyrosine kinase catalytic domain signature 1212 1225 IPR001245 GO:0004672|GO:0006468
Amo03g2089 1407 PRINTS Tyrosine kinase catalytic domain signature 1249 1267 IPR001245 GO:0004672|GO:0006468
Amo03g2089 1407 PANTHER SERINE-THREONINE PROTEIN KINASE 159 906 - -
Amo03g2089 1407 CDD PB1_UP2 199 297 - -
Amo03g2089 1407 CDD STKc_MAP3K-like 1136 1393 - -
Amo03g2089 1407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1255 1267 IPR008271 GO:0004672|GO:0006468
Amo03g2089 1407 SUPERFAMILY Protein kinase-like (PK-like) 1124 1392 IPR011009 -
Amo03g2089 1407 PANTHER SERINE-THREONINE PROTEIN KINASE 930 1400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2089 Amo-Chr3 77777238 77785962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2089 194 664 MAP Kinase Kinase Kinase AT3G46920 35.400 1.31e-63 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo03g2089 PK_Tyr_Ser-Thr 5.9e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2089 - - ahf:112732322 2771.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3119 01 102581486 102589428 Amo03g2089 03 77777238 77785962 PCT