Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2050 ATGATTTTGGCTTATGAGGAATTAGCTCCCTCAGTTAAAACTTTTGGTGAACCTGGCTTTCCACCGGCGGGAACACACGTCTTCTACTTCCCTCAAGGACACAGTGAGCAGGTCGCAACGTCTTTGAAGAAAGATGTGGATGGACAGATTTCTAACTATCCCAATCTTCCATCCAAGTTGTTGTGTCTTTTTCAGTGTTACTTTGCATGTAGAGTGAGTCACATGGGGTGGGGTAGCAATGAAGACTTGAATGAAAATTTGTACAAAATTTTATCAAAGGTAAAATTTTAA 291 0.4055 MILAYEELAPSVKTFGEPGFPPAGTHVFYFPQGHSEQVATSLKKDVDGQISNYPNLPSKLLCLFQCYFACRVSHMGWGSNEDLNENLYKILSKVKF* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2050 96 PANTHER AUXIN RESPONSE FACTOR 20 64 - -
Amo03g2050 96 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 64 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2050 Amo-Chr3 74740419 74740870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2050 20 65 B3 DNA Binding Superfamily AT5G20730 63.043 3.66e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2050 - - pper:18788345 87.0409