Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2037 ACTTTCAAGCGCAGGAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTCAAATTCATTCGCTGCTCCAATTGCGGCAAGTGTTGTCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAACTGTATGTGAAGATGCAGTATTGTGTTTCGTGTGCTATTCACTCTCACGTTGTGAGGGTACGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAGCGCTTTGCTAGGCGCAGGGATGATGCGCCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTGCTGGAGCTGGAGCTGCCCCTCGTTTACCTTGGGATAATGATGTTTTTTTCTTAGTCTGGTTGCCTGGAACTGAACCATAA 438 0.5068 TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGAGAAPRLPWDNDVFFLVWLPGTEP* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2037 145 MobiDBLite consensus disorder prediction 88 109 - -
Amo03g2037 145 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 - -
Amo03g2037 145 MobiDBLite consensus disorder prediction 84 128 - -
Amo03g2037 145 Pfam Ribosomal protein S26e 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo03g2037 145 Gene3D Ribosomal protein S26e 1 113 IPR038551 -
Amo03g2037 145 PANTHER 40S RIBOSOMAL PROTEIN S26 1 126 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo03g2037 145 ProSitePatterns Ribosomal protein S26e signature. 72 79 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2037 Amo-Chr3 74080073 74081041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g2037 1 115 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 84.348 1.31e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2037 K02976 - gmx:100305706 197.978