Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2027 ATGGAGGGGACATTAGCTGAGATAGGGACGTTAATGTCTTGTGATGCTAATAGAAGGCCATTACAGGCTCATTTTGAGGATAACGATTCTTCTCCTTCGACATTGAGGATGTCCAACAATTCTACTGTTTCCTTGAATGCCCAAAATATGGATGTAGAATTTGATTGGCTACCTAAATTGGGCAAAACCTTTAACATTGTAGAAGAGGCATGGCAATTTTGGATTGATTATGGTAGGAGGATGGGATTTGGTGTCCACAAGCAATATTCTAACAAAAATGCAGATGGAAAAATTCTAAGTCTTAGGTTCGTCTGTGCCAAAGAAGGACTTGAAACAAGGACTAATTGTTTGGTAAAATTAGGAATAAGATATATTAAAGCATGTCAACGAAAAATACCTCAGGTTCAAGATCGAGAAATTGAATTGGTAGATGACTCGGGAATCACACAACGGGCTTCATTTGAATTGATGAGTAGACAAGTTGGTGGAAGAGAAAATATTGGTTATACACATTTAGACCAAAAAAATTATCTCCGTACCAAAAGAATGAGAAGCATGACATACGGGGAGGCAGGCAGCTTAGTTGTCAATGATAAGAGATACAATGAACTACAAGAAAGTTTGAGACTTTTGGGTTTTGGCATTTCGTGTTGTCATACAATCAAAGTTTTAGATGTTACAGATATTGAATTACTGCCTGATCAATATATTTTGAAGAGGTGGACAAGAGGAGCAATGAGCGGATTACAAACATGTCCTAAGTTAGTAAGAACAGTCACACAAGCCTCTGATTGTAAAGAAGCACGTGTCTTTATGGAAAAAGCTGTGGAGGAGTTAAGTAAAAAGTTGATGATATCTACAAACTAA 867 0.3714 MEGTLAEIGTLMSCDANRRPLQAHFEDNDSSPSTLRMSNNSTVSLNAQNMDVEFDWLPKLGKTFNIVEEAWQFWIDYGRRMGFGVHKQYSNKNADGKILSLRFVCAKEGLETRTNCLVKLGIRYIKACQRKIPQVQDREIELVDDSGITQRASFELMSRQVGGRENIGYTHLDQKNYLRTKRMRSMTYGEAGSLVVNDKRYNELQESLRLLGFGISCCHTIKVLDVTDIELLPDQYILKRWTRGAMSGLQTCPKLVRTVTQASDCKEARVFMEKAVEELSKKLMISTN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2027 288 Pfam FAR1 DNA-binding domain 72 116 IPR004330 -
Amo03g2027 288 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 116 IPR031052 GO:0006355
Amo03g2027 288 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 213 255 IPR031052 GO:0006355
Amo03g2027 288 PANTHER OS03G0181600 PROTEIN 46 116 - -
Amo03g2027 288 PANTHER OS03G0181600 PROTEIN 213 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2027 Amo-Chr3 73722509 73725808 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g2027 FAR1 7.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2027 - - ahf:112709060 248.054