Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1971 ATGAGGTTGTTATCGAGTTCGATTCTTAACCTCCTCCTTCTCTGCGACCTGCTTCTCTTTTGTCCCTCATTCTTCTCTCTCGTCTCTGCTGAGTCGGAGTCCGAGCCGGAGCTTCTCCTCCGTGGAACCAACGCAACCGCCACCGGCAATGCCTCGCTTGCGAGATCCGGCGAGGATAGCTTCGCCAACATGATTGATCGGGCGCTCGAGAGAGAGTTCCCCGAGAATGAACAGAATGAAGGTAATGATGCTGGCGGTTTCAACAATAGTGTTGCTGAACAGCAGGCTGTTTTGGAAACTGTTGCTAGAGTTAAGTCCAAGAAAAATGAGAGCAAAGAAGAAAAATCATTTCATATTCATGATGTTTTCCATTTGGATACTGAGAATCGTGCAGAGGATATGCCAACCTTAATTGATCGAAAGGATAACGTGTTTATCATCTCCAATCCCAAGTCAAAGTATCCTGTTCTTCAAGTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTTTCTGCAACATGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTTATGACAGGATATCTGTTGGCAGGATCACTCATTGGACCTGGTGGCTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACTGTTGCTCAATTTGGTGTTATCTTTTTGCTTTTTGCATTGGGATTAGAATTTTCAACAACAAAGCTTCGAGTTGTTCGAGCGGTGGCTATTCTTGGCGGTCTACTTCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTACGCTATGTGGTGGTAAATCATCTGAAGGAATATTTGTGGGTGCATTTCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAATTCTTGATGGAAAGGAATAGTGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACACTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCATTGCTTCCAGTATTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAATATCCATGACTAAATCGTTGGTCATCTTAATTGCATTTTTGGCCATTTTGTCGATAGTATCTCGTACTTGTGTACCATGGTTTCTTAGGCTTATGATAAGCCTATCATCTCAGACCAATGAACTTTATCAATTGGCATCAGTGGCATTCTGCCTACTTGTGGCTTGGTGTAGTGATAAGTTGGGTTTAAGTCTCGAACTTGGTTCCTTTGCTGCGGGCGTGATGATATCAACAACAGATCTTGGTCAACATACACTAGAACAAGTTGAGCCAATTCGCAACTTTTTTGCCGCACTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTTCTTTGGAATCATGTTGACATCTTATTGGCAGCTGTTATACTGGTGATCATCATAAAGACAATTGTAGCTGCATGTGTTGTCAAGGGGTTTGGTTACAACAACAAGACTTCACTTCTTGTTGGGATGTCTTTGGCACAAATTGGGGAGTTCGCCTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTGGAGGGAAAGTTGTATCTATTACTCCTTGGAACAACGGCTCTCAGTCTGGTGACTACACCTCTGCTTTTCAAGTTAATTCCTGCCGTGGTGCATCTTGGTGCTTTGCTGCGGTGGTTCCCTCCTGACAGTCCATCTGAGATTCCCTATAAGGGGGACAGCTTTCGGTCAGACAGTGCTAAGCGTGTTACTTTGTTGGTTCAAGGCTCTCATAATTCATGA 1758 0.4357 MRLLSSSILNLLLLCDLLLFCPSFFSLVSAESESEPELLLRGTNATATGNASLARSGEDSFANMIDRALEREFPENEQNEGNDAGGFNNSVAEQQAVLETVARVKSKKNESKEEKSFHIHDVFHLDTENRAEDMPTLIDRKDNVFIISNPKSKYPVLQVDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITATLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMTKSLVILIAFLAILSIVSRTCVPWFLRLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVAACVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSPSEIPYKGDSFRSDSAKRVTLLVQGSHNS* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1971 585 Pfam Sodium/hydrogen exchanger family 168 537 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo03g1971 585 PANTHER K(+) EFFLUX ANTIPORTER 6 9 585 - -
Amo03g1971 585 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 9 585 IPR045158 GO:0015386|GO:0071805|GO:1902600
Amo03g1971 585 Gene3D - 161 544 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1971 Amo-Chr3 69139783 69146434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1971 3 585 Antiporters AT2G19600 79.592 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1971 - - gmx:100788884 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3150 13 93424940 93431453 Amo03g1971 03 69139783 69146434 hybridization