Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1965 GTGACGCTGAAGGATATCCTCTGTGTGCTTGCATGTTGTGAATTTTGTGTACCTAGAAGGTTTACATCTGATCGCGAACAAGCTGTTGCAGGTGGAAGGGGTTTACCATCCACATTTCTCAGCCAGCTACGAATCACGTGCGGGTGCTTAATTAAGATTGTCTCCCTCAATAAGTTCAATTCTTTACTCATTGGATTTCAAGCTTTGGTTGTCATCAAGTTGTATGCTGTGGCTAGGTTTGGGGCATTGAAATTAAAACGTTATACTGGACTCTTAAACAGTTGGCTTAGGTTAAGAGCCTTGGATGATGTGAAGAATGATTCTGATAATGATTTGGGCGATGATTTCGATTATCAACCGATTGCAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGCATCATTAGCAGGCAACTTATTTGCAACAAAGAGGGTGGAGGAATGGTAAAGCTTGACTATGGCTACGGTATATGGAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCGTGCGATGTGGTCCCATTATTTCCTACGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGCGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGATTTCATGCATAACCTGGATAGGGCCTTAAAAGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTTCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAAATCTGCATCTTGTTATTTCACGCAAAACATTTTCAAGGAAATTCGTAATAAGATTCAGAGGGCAGGGGCTTTGAATATCAAGGTACTAAGCACAACCTTGGACAAGGTCGAGTTTAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATTGA 1101 0.4169 VTLKDILCVLACCEFCVPRRFTSDREQAVAGGRGLPSTFLSQLRITCGCLIKIVSLNKFNSLLIGFQALVVIKLYAVARFGALKLKRYTGLLNSWLRLRALDDVKNDSDNDLGDDFDYQPIAEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGSIISRQLICNKEGGGMVKLDYGYGIWKHNLVGSTWMEKTYETRAMWSHYFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQFSEPVMITSLEVYEKSASCYFTQNIFKEIRNKIQRAGALNIKVLSTTLDKVEFSVTALGDPAKD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1965 366 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 221 335 IPR031052 GO:0006355
Amo03g1965 366 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 221 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1965 Amo-Chr3 68752882 68755130 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g1965 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1965 - - ahf:112803750 282.722