Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1947 ATGGCAGGTGCAGGTGCCATGAAGAAGGTCGACAGGATTCGCCAAATCGTTCGCCTCAAGCAGCTCATGATGCGGTGGAGGGTCATCAGCCACCGCCGCCACCACCACCACTACGACTCCTCCTCCCTCGATTCAAAACCCTGCACATCGTCGCCACGACGCGCTCCCTCGGGGTTCGTGTTCGTGTACGTGGGTCAAGAACGCAAACGTTTCGTGATTCCCGCAAGATTCCTCAACCTGCCGGTGTTCGCTGATCTCCTCGAAGAAACCGAAGAGGTTTTCGGTCTTCGATGTAGCGGCGGTTTACTCCTCCCTTGCGAAGTTGCGTTCTTCAGTAACATCGTGAAGCACCTCGAGAAAGACGAACACAAGTACGGGAAGCTTTCTTTGGAGGATTTCGTGAACATGGTTTCTGACTTGGCTTCTGATTCTTCCTGCAAAGAAGGCATTGTTGCCTTCACTCCTCTCTTGCAGAAAGCAAGGGTTTAG 489 0.5337 MAGAGAMKKVDRIRQIVRLKQLMMRWRVISHRRHHHHYDSSSLDSKPCTSSPRRAPSGFVFVYVGQERKRFVIPARFLNLPVFADLLEETEEVFGLRCSGGLLLPCEVAFFSNIVKHLEKDEHKYGKLSLEDFVNMVSDLASDSSCKEGIVAFTPLLQKARV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1947 162 Pfam Auxin responsive protein 18 117 IPR003676 GO:0009733
Amo03g1947 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 152 IPR003676 GO:0009733
Amo03g1947 162 PANTHER - 10 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1947 Amo-Chr3 67164552 67165224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1947 9 134 Calmodulin-binding Proteins AT3G43120 34.437 1.63e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1947 K14488 - gmx:100793118 189.119