Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1937 ATGTCAGCTCCACTACCACTAACCCTTTTCCTCTTCTGCATTATCATCTTCTTCTTCCATTGCTGCATGTGCAATGACTCATCATCAACAACAACCCTTCAAACCCTTAAGCCCATCCTCCCAAACAAAAGCCYAGRCCCAGGCCCATCTCATCCATCAATAGCAACAATCCCTGCATTCCCTGAACAATCTGATGTCAAAGGTTGCCCCTTGACACTCTCAGATGAACTCTTTGACGGTATAAAGAATGCTTGTGGAGGCGGTGGTGGTGGTGGTTCTGACATGGAGCTCCACCGCACACGGTGCTGCCCTGTTCTTGCATCATGGTTATACTCTGCATATTCTTCCATTGCATTAACCYATAGCCATACCCACACATCATCATCATCATCATCATATGAGATRCCATTGTTAYCAGATGACTCAGAAACATGTGTGAATGAYTTAGAGAATGCACTGAAAGTGAGAGGGATTCAGCTGAAAAGACCCAATGAGACATATGATGTTGTGTTCTGCTTCTGTGGGATAAGGCTTCACCCTCTGAGTTGCCCAGATGCATTTTCAGTTAATGAAAATGGTGAACTTAAGAATTGCATCAGTAGAACCAACAATGTCAATGGCTTCCCTGGTCTTGGTGGCTACTCCAAGTGCTTGAACACACTCTACAAGGTCAAACCAATTGAAGCCAAAGTTCTTGAAAAGGGTTGCAAGGAGATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGAAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTAAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGTGGCTCARTCAGAAGGAAGAAGATAA 921 0.4397 MSAPLPLTLFLFCIIIFFFHCCMCNDSSSTTTLQTLKPILPNKSXXPGPSHPSIATIPAFPEQSDVKGCPLTLSDELFDGIKNACGGGGGGGSDMELHRTRCCPVLASWLYSAYSSIALTXSHTHTSSSSSSYEXPLLXDDSETCVNDLENALKVRGIQLKRPNETYDVVFCFCGIRLHPLSCPDAFSVNENGELKNCISRTNNVNGFPGLGGYSKCLNTLYKVKPIEAKVLEKGCKEMRASGLLLKFLEAILKAGNRMNAETSRGNAQGFNLSALRKLPDVKSIDGKTSLLHFIVEQVAQSEGRR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1937 306 Pfam SPARK 67 191 IPR043891 -
Amo03g1937 306 PANTHER GPI-ANCHORED PROTEIN 4 225 IPR040376 -
Amo03g1937 306 SUPERFAMILY Formin homology 2 domain (FH2 domain) 229 303 - -
Amo03g1937 306 Gene3D Formin, FH2 domain 217 305 IPR042201 -
Amo03g1937 306 Pfam Formin Homology 2 Domain 230 301 IPR015425 -
Amo03g1937 306 PANTHER PROTEIN, PUTATIVE-RELATED 4 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1937 Amo-Chr3 66476799 66478034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1937 206 306 FH2 protein (formin) Gene Family AT1G70140 59.406 7.22e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1937 - - aip:107641463 371.703