Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1934 ATGCCTCTTCTACTCTCAGCTTCACAACCTCCCCTACTCCCTCTCATCCCACACAGTAATAAAACTCTCATCACACTTCCTAGAAAGCGCTTTGGTTTCGCTCCCAACACCTTAACAACCCCACCCTCTCTTCGTTCCAGGCGCATTCTCCCTAAATCTTCTGCTTCTTCCTCTTCTTCCATCAACGGTGTTTCCCTTGAGGACATTCCAGAACATTCCAGAAACGAAGAATCAACTTCTCCTACTCGGGATGAGTTCCTTCTCCTCCAAACGCTCCGAACCTGGCTCCGCTTCCTCCCTTCCATTCTCCCCGGTGGATCCTGGTGGAACTTCGACGACGACATCGAAATCGAGCTACTGGCTCAGCCGGTTTCTGTCTGGCGCGCACTCGGCAAGATGTGGCACCTCGTCGCGCGTGACCGCTGGATCATCTTCGCCGCCTTCACCGCTCTCATTTTCGCGGCGGTGTCTGAGATTTCGATACCGCATTTCTTGACGGCGTCGATTTTCACGGCGCAGAGCGCGGAGATTGCGGTTTTTCACCAGAATGTGCGGCTTTTGGTTCTGTTGTGTGTGATCTCGGGAATATGCAGTGGGATAAGAGGCTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTATTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGTAGACTCGGGGCAGATTGTCAACAAGTGTCTAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGGACAGGTTCATTAATCTACTTGGTGATTTTGTCTTGGCCACTTGGTTTAAGTACGTTGATGATATGCATCATGTTAGGAGCAGTTATGGTACATTATGGAAGGTACCAGAAAAAGGCAGCAAGGCTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACCTTATCTCTCATTCGAACTGTCCGTGTTTATGGAACAGAAGAAGTAGAACATGGAAGGTACAAATGGTGGCTGGAGAAATTAGCTGACATAAGCCTGCGACAAAGTGCTGCATATGGGTTTTGGAATTTAAGCTTCAATGCTCTTTATCATTCAACTCAGGTTATCGCTGTGCTGTTTGGAGGGATGTCTATTCTTGCTGGACATATTACTGCTGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAATCTGTTGGAGCTAGTGAAAAAGTATTCCATTTAATGGATCTCTTACCTAGCAGCCAATTCACAGAAAGAGGAGTAAAGTTGCAGGGGTTGATGGGGCAAATCGAGTTTCTAAATGTATCTTTTCGCTACCCTTCAAGGCCAACGGTATCTGTGGTGCAACATGTAAACTTTGTGGTCCATCCCAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACACTGGTGAACCTTTTGCTTCGTCTCTATGAGCCGACAAGTGGCCAGATTTTGGTAGATGGCATTCCTATTAAAGACTTSGACATCATGTGGTGGAGAGGGAGAATAGGATATGTTGGACAGGAACCCAAGCTTTTCCGGATGGATATTAGTTCAAACATCAGATATGGTTGTACTCGCGATGTAACACAGGAAGATGTTGAATGGGCTGCAAAGGAGGCCTATGCTCATGATTTCATCACAGCACTTCCTAACGGTTATGAAACAGTTGTTGACGACGATCTATTAAGTGGGGGTCAAAAGCAGCGAATCGCTATTGCTAGAGCCATCCTTCGGGACCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAACGTTAAGGGTGTTCTTCGATCCGTCAGAAGTGACTCTACATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCCACCATACAAGCCGCTGACAGGATTGTGGTAATGGATGGTGGTCAAGTTGTTGAGATTGGAAGTCATAGAGAACTTCTCCTAAAAGATGGTTTATATGCTCGGTTGACTCGAAAACAGGCAGATGCCATGGCATGA 2118 0.4537 MPLLLSASQPPLLPLIPHSNKTLITLPRKRFGFAPNTLTTPPSLRSRRILPKSSASSSSSINGVSLEDIPEHSRNEESTSPTRDEFLLLQTLRTWLRFLPSILPGGSWWNFDDDIEIELLAQPVSVWRALGKMWHLVARDRWIIFAAFTALIFAAVSEISIPHFLTASIFTAQSAEIAVFHQNVRLLVLLCVISGICSGIRGCCFGIANMILVKRMRETLYSSLILQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGSLIYLVILSWPLGLSTLMICIMLGAVMVHYGRYQKKAARLIQEVTASANDVAQETLSLIRTVRVYGTEEVEHGRYKWWLEKLADISLRQSAAYGFWNLSFNALYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLLPSSQFTERGVKLQGLMGQIEFLNVSFRYPSRPTVSVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDGIPIKDXDIMWWRGRIGYVGQEPKLFRMDISSNIRYGCTRDVTQEDVEWAAKEAYAHDFITALPNGYETVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSTSRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAMA* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1934 705 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 460 699 IPR003439 GO:0005524
Amo03g1934 705 Gene3D - 450 704 IPR027417 -
Amo03g1934 705 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 145 426 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo03g1934 705 SMART AAA_5 487 676 IPR003593 -
Amo03g1934 705 Pfam ABC transporter transmembrane region 144 411 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo03g1934 705 SUPERFAMILY ABC transporter transmembrane region 132 442 IPR036640 GO:0005524|GO:0016021
Amo03g1934 705 MobiDBLite consensus disorder prediction 53 80 - -
Amo03g1934 705 CDD ABC_6TM_TAP 147 434 - -
Amo03g1934 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 452 700 IPR027417 -
Amo03g1934 705 ProSitePatterns ABC transporters family signature. 598 612 IPR017871 GO:0005524
Amo03g1934 705 PANTHER ABC TRANSPORTER B FAMILY 84 704 - -
Amo03g1934 705 Gene3D ABC transporter type 1, transmembrane domain 127 446 IPR036640 GO:0005524|GO:0016021
Amo03g1934 705 Pfam ABC transporter 479 626 IPR003439 GO:0005524
Amo03g1934 705 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 84 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1934 Amo-Chr3 66440298 66446977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1934 215 703 Calmodulin-binding Proteins AT2G36910 34.331 5.75e-70 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1934 - - gmx:100813359 1085.09