Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1923 ATGGGACTCTTATCACTTACATTCCATCCTTCTCCCGCTTTCAATCCCTCGATTTTTACGCTTCCTCCCCACCGCTGCCACCGCCCCTCTTCACTCGCCGTCAGAGCCACTTCCGCCGCCGGCACCCCGCAGCCTCTGCTCCAAGTCAATGACCTGAGGGCGAAGATCCTGGAATCCGGCGTCGAGATTCTCCACGGCGTCAACCTCACGGTCAACGAGGGAGAGGTTCACGCCATCATGGGAAAGAACGGTTCCGGGAAAAGCACTTTTGCTAAGGTTCTTGTGGGTCACCCTGATTATGAGGTTACTGGAGGCAGTGTTGTGTTCAAAGGGGAGAATTTGCTTGAAATGGAACCCGAGGAGCGGTCACTAGCTGGTCTTTTTATGAGTTTCCAGTCCCCTGTTGAGATTCCTGGTGTTTCTAATGATGAGTTTTTGGTCATGGCATATAATGCACGGAGGCGAAAGCTTGGCCTCCCTGAGCTTGGACCACTCGAGTGCTTCTCTTACCTGATGGAGAAACTCCAGCTTGTTAACATGAAGCCGGACTTCCTCAATAGGAATGTCAATGAAGGATTCAGTGGTGGAGAACGCAAACGCAATGAAATTTTGCAGCTTGCGGTTTTGGGGGCAGACTTGGCTATTCTGGACGAAATTGATTCTGGATTGGATGTTGATGCACTCAGAGATGTTGCAAATGCAGTCAATTGTATACGTGCCCCAAAGAATTCTTTGATGATGATAACTCACTATCGAAGAATACTGGATCTTTTAAATCCGACACATGTCCATGTTATGGACAAAGGGAAAATTGCGAGGACAGGTGACATATCCATTGTAGAAACTATTGAGACTGAGGGATATGAAACAGTTGCAGCTTTGACCTAA 888 0.4842 MGLLSLTFHPSPAFNPSIFTLPPHRCHRPSSLAVRATSAAGTPQPLLQVNDLRAKILESGVEILHGVNLTVNEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVSNDEFLVMAYNARRRKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNCIRAPKNSLMMITHYRRILDLLNPTHVHVMDKGKIARTGDISIVETIETEGYETVAALT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1923 295 Pfam ABC transporter 64 218 IPR003439 GO:0005524
Amo03g1923 295 CDD ABC_FeS_Assembly 47 288 IPR010230 GO:0005524
Amo03g1923 295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 293 IPR003439 GO:0005524
Amo03g1923 295 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Amo03g1923 295 SMART AAA_5 73 270 IPR003593 -
Amo03g1923 295 Gene3D - 46 294 IPR027417 -
Amo03g1923 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 277 IPR027417 -
Amo03g1923 295 TIGRFAM sufC: FeS assembly ATPase SufC 47 290 IPR010230 GO:0005524
Amo03g1923 295 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 37 292 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1923 Amo-Chr3 65698147 65701319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1923 61 275 Calmodulin-binding Proteins AT2G36910 23.684 1.68e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1923 K09013 - gmx:100798005 448.358