Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1895 ATGGATGATTCAACCTCAGATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTAGAAAATTTTACAAGAACTACGCCAAGGCTGCAGGTTTTTCTACAAGAGTTCGAAGCACAAATAGGAAGGGAAACAAGATTGAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACAGCCAGTTTAAACTGTCCTGCAAGAATTTATATACATACATTGAAGGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCTTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCT 489 0.4172 MDDSTSDCQLNQGEVDYEFESNEVPEPLSVVDDQFVPKVGMTFTTLEDARKFYKNYAKAAGFSTRVRSTNRKGNKIENQLITCSREGKWKSKISPTEKTNPTASLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1895 163 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo03g1895 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1895 Amo-Chr3 61723113 61724174 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g1895 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1895 - - adu:110278638 305.064