Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1889 GCAAGGGCTGGAATCAAAGAGGTTCACTTTTTACCTTTCAATCCTGTTGATAAGAGAACTGCTTTGACTTACATTCATATCATGAACTTATGTAATCTAAGGAATGATGTTAAGAAGAAGGTTCATGTCATTAGTGACAAGTTTGCCGAAAGAGGCCTTCGTTCCCTAGCCAAAAGCAAGGACAACCCTGGAGCTCTATGGCCCTTTATATATGCAACTTTATTACACTTACATTGTGGTTTATACTCTATACATCCACTGAATCTAGCTGCGATGACATACATGGAAACTCCATTAGAATCAAGTGCAGACAATCATCTTAAACCCAAAGAAGAAGAGAAGAAAGAAGAAGACAGCTTGAGTCTTGCCATGGAAATGCTGGGTTTGAATGTGGCTCCACTGGCGGTAAATTCAGCTGTTGAGCTTGGTGTGTTTGACACCATAGCCAAAGCTGGTGAAGGTGCCATGCTCTCTGCAAAGGAAATTGCGTCTCAGATTGGGAGCAACAACTCAAAAGCACCTCACATGCTGGATCACTTTCTTAAGTTGTTGGCAAGTCACTCTCTCCTTTGTTGCTCTGTTTTCCAACAAGATCATAGTCACAGACTCTACAGCCTCTCCCCTAGCTCCAAGTATTTTGTCACCGATGCTGATGACGGCAGCTCGTTGGGACCAACCTTTGCTTTGCTTCTCGACAATGTCTTCTACCAAAGCTGGACGGAAGTGAAAAGAGCAATTATGAAAGGTGGAATTCCATTCAACAGGGTTTATGGCATGCATGCCTTTGAGTATCCAGGCGTAGATCAAAGGTTCAATTAG 819 0.4298 ARAGIKEVHFLPFNPVDKRTALTYIHIMNLCNLRNDVKKKVHVISDKFAERGLRSLAKSKDNPGALWPFIYATLLHLHCGLYSIHPLNLAAMTYMETPLESSADNHLKPKEEEKKEEDSLSLAMEMLGLNVAPLAVNSAVELGVFDTIAKAGEGAMLSAKEIASQIGSNNSKAPHMLDHFLKLLASHSLLCCSVFQQDHSHRLYSLSPSSKYFVTDADDGSSLGPTFALLLDNVFYQSWTEVKRAIMKGGIPFNRVYGMHAFEYPGVDQRFN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1889 272 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 124 272 IPR016461 GO:0008168
Amo03g1889 272 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 96 272 - -
Amo03g1889 272 Gene3D - 1 129 IPR023299 GO:0000166
Amo03g1889 272 SUPERFAMILY "Winged helix" DNA-binding domain 115 216 IPR036390 -
Amo03g1889 272 Pfam Dimerisation domain 136 185 IPR012967 GO:0046983
Amo03g1889 272 Gene3D - 130 253 IPR036388 -
Amo03g1889 272 PANTHER O-METHYLTRANSFERASE 96 272 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1889 Amo-Chr3 61512402 61513597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1889 99 272 Monolignol Biosynthesis Gene Families AT5G54160 40.341 6.03e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1889 K13066 - ahf:112790788 351.673