Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1876 ATGTGTGCCGTCTTTCACTTGTTTCATTTCCATCCATTTCATCCCTTCCCTACCACCGCCGCCGTACATCACCAACAAAAGTCATCACCACAGGATCTTCCCCTTCCCCAAGCACCTAGGAATAGCTTGGAAGAATCACACCATCTTTCTACTACACAACCTCCTTCACATCTCATCGAACAACAACACTTCAAAATTCCAAAGAAGATACAAGTAATGAAAACAAGTAGTGAAGTTGACATGTGTTGTTCATCAGTGGAATCTCCGGGGACATCAGCAAAGACACCAACATTAGTAGCAAGGTTGATGGGTCTTGATCTTCTACCTCCACCTTCTTCAAACTTGTCATCACCCTCTTGTTCATCTTCATCATGCATTTCCACACCAAATCTGCACCTCTTATCCAAACACAGGAACAGCACTGATTGTGTTATTGTTGATCACTCCTCACCAAGAACAAGATCAGATCTTGACTACTATCACCACAGGCTCTCCCTCCAAATCAACACCAACACCAACAAGGACGAGGATTTGGAGATGATGCGCTTCTCATCATCATCATCATCATTACTCTCAAAAAGGAACAACCACTTTGATGACAACCATAATAATAGTGTCTCTAATGGCAGAACAAGTTCTTCTTCTTCATCATCATCACCAAGCCATTTGGCAAGGCAAATTGTGAAGCAAGTTAAGAAGAATGTGATGATGAACAGTGGTAGAAAAGTTGGACAAGACATCACCAACACAATCAAACAAAGAGAACCACAACTTGTTACCCAAATCAAACTTAAAAAGAAACTTTCTTCCAAGCCATCATCACCATCACTTGATAATCATCATGATTCAAACTCATTATCTTTTTCTCCAAGGTTAAGGTTCATAGAAACCAAAAACAACAGCCATAAGCCACCAGCTGCTCCACCATCACCACCACCACCACCACCACCTCCACAACAAGTGGAAGAGCTTCCAAGAGTTTTGATAAGGCCAAAGGAAGAAGGGTCGTTGCAGCAGAATCAGAAATCATCATCATCGTCAGTGGCAAAATGTAATAAGAAGGTGAACAATGAAAAGTTCAGCTCAMCATCAAGGCTCAAAAAGCAAGAGGAGCCATTCATAGTTCGACCAACTTCACCACCAACAACTAGAACCGGTGACATCATCATCAAGAATGCCACAAAAACCCATCATAAGAAGACTCATCCATTGTCCAACAATCTTCTCAATAACATCAACACTGTCGTCCCCAACCTTTTCCCTATCAAGACTGAAGCTTCTCCTCCACCAACCAAAATTAATCACAATAAGAAGCAGTCAGAGGTATGTGACAAAAGTAGCCCCCAACAGTTATCTAGTTCTTGGAGCCATCATCACAGTCACAGGTACAAACAAGAAGGGATAATAAGCACACTCGCCACCCGAGATTTCAGCACAAACGACATCGTTCAAGCCAAAAGCACTAACCAGAATAATGCATATTCATCATCATCCACCACTGGAGAAGAACTTGCAGCAGCTGCAGCTGCTGAATCTGAACATCACGGACCAGAATTTCAGTATATCACAGGAATCCTAAGCCGTACTTTCAACAAGGAAGAACAACATGCCACAACAACAGGTCAACGCTTCTTTCATGACCTCGAAGAACACCCAATTTTGAATTCCCATGTTTCCACTCCCGAAAACGTTAAAGATTGCATCTTTTCGATGAAACAAAAACTGGGTCTGCGCTGGAATCGGAGGTTGATGTTTGACTTGGTGGATGAGGTGTTAATGGAGGTTCTTAGGCCTATAAAAAGCGAAGAAAAGAGTAGGCTTTGGTTTTTGCATGGGCGTTGTTGTTGTTATTACCAAGGGACGGTTGAAGGATTAATGGAGAGAGTGTGGAAGAGGATAGGGAAGTTCCCATGCAAGAGGTGTGAGTTTTTGGAGGACATTGATTGGTTGATAGAATCAGAGGACATGGAGAAGGTGAAGGTGGAMGTTGAAGAAGGTTTGGAGGAAGAAGGAGAAAGGTTGGTGGCAGAGATTGAAGGGAACATATGGAACACATTAGTGCATGAATCCCTTATGGTTATGGTCACTGCCTATTAG 2097 0.4254 MCAVFHLFHFHPFHPFPTTAAVHHQQKSSPQDLPLPQAPRNSLEESHHLSTTQPPSHLIEQQHFKIPKKIQVMKTSSEVDMCCSSVESPGTSAKTPTLVARLMGLDLLPPPSSNLSSPSCSSSSCISTPNLHLLSKHRNSTDCVIVDHSSPRTRSDLDYYHHRLSLQINTNTNKDEDLEMMRFSSSSSSLLSKRNNHFDDNHNNSVSNGRTSSSSSSSSPSHLARQIVKQVKKNVMMNSGRKVGQDITNTIKQREPQLVTQIKLKKKLSSKPSSPSLDNHHDSNSLSFSPRLRFIETKNNSHKPPAAPPSPPPPPPPPQQVEELPRVLIRPKEEGSLQQNQKSSSSSVAKCNKKVNNEKFSSXSRLKKQEEPFIVRPTSPPTTRTGDIIIKNATKTHHKKTHPLSNNLLNNINTVVPNLFPIKTEASPPPTKINHNKKQSEVCDKSSPQQLSSSWSHHHSHRYKQEGIISTLATRDFSTNDIVQAKSTNQNNAYSSSSTTGEELAAAAAAESEHHGPEFQYITGILSRTFNKEEQHATTTGQRFFHDLEEHPILNSHVSTPENVKDCIFSMKQKLGLRWNRRLMFDLVDEVLMEVLRPIKSEEKSRLWFLHGRCCCYYQGTVEGLMERVWKRIGKFPCKRCEFLEDIDWLIESEDMEKVKVXVEEGLEEEGERLVAEIEGNIWNTLVHESLMVMVTAY* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1876 698 MobiDBLite consensus disorder prediction 334 359 - -
Amo03g1876 698 MobiDBLite consensus disorder prediction 304 322 - -
Amo03g1876 698 MobiDBLite consensus disorder prediction 190 386 - -
Amo03g1876 698 MobiDBLite consensus disorder prediction 241 295 - -
Amo03g1876 698 Pfam Domain of unknown function (DUF4378) 518 689 IPR025486 -
Amo03g1876 698 MobiDBLite consensus disorder prediction 21 36 - -
Amo03g1876 698 MobiDBLite consensus disorder prediction 43 58 - -
Amo03g1876 698 MobiDBLite consensus disorder prediction 201 225 - -
Amo03g1876 698 MobiDBLite consensus disorder prediction 21 58 - -
Amo03g1876 698 Pfam DUF761-associated sequence motif 84 110 IPR032795 -
Amo03g1876 698 MobiDBLite consensus disorder prediction 421 459 - -
Amo03g1876 698 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1876 Amo-Chr3 60996720 60999602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1876 76 690 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.678 7.24e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1876 - - aip:107644757 1132.86