Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1868 ATGTCATTCTTATCATTACACTACCCACCCGACTACATGCAAGCAAGAAGCAATGGCTCGATTACTAGCTCAACAATCGCCTTCTGCTGCATTACTAATCTCTTCGACACTCTTAGGTGGCTCATGTTTGGGAAGCTAAGTATCAGAATAAAAATCCATTTTACTAAGAATCAAACATGCATGCGAACAGTTACAAGAAATTATGTTAGTTACAAGAAAATGGGGGTAATGCATAAAAATCTTGACGTGGAGAAGTGTGGAGAATATGGAGGTGTGATTGGATTTGGTTGGTCTAACGGGGTTGTGTTGGCATTCTTAGAGGAGTTTTGTTGGTCTCAAGAGTATAGATTGCTGATATGTGCTTTCAAATTCAAAGTTTTAAACAAGCCTTGA 393 0.3868 MSFLSLHYPPDYMQARSNGSITSSTIAFCCITNLFDTLRWLMFGKLSIRIKIHFTKNQTCMRTVTRNYVSYKKMGVMHKNLDVEKCGEYGGVIGFGWSNGVVLAFLEEFCWSQEYRLLICAFKFKVLNKP* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1868 130 SUPERFAMILY Six-hairpin glycosidases 60 112 IPR008928 GO:0005975
Amo03g1868 130 Gene3D - 45 116 IPR012341 GO:0005975
Amo03g1868 130 Pfam Trehalase 59 109 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1868 Amo-Chr3 60150476 60152030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1868 62 111 Trehalose Biosynthesis Gene Families AT4G24040 53.571 2.33e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1868 K01194 - csin:114298925 80.4925