Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1829 ATGAGAGAGGAGGAGCCGTCACCAAATGCGTCGCCGCCGCTGGAGGAGCTTCGCGCTTCGCCGTCGCCGAGGAGGGGAAAGAGGAGCTGCTCCTGTCGCGTCAGTCACTGTCGTGCTTCCTGGTTGCTGATGAGGGAGCCGCGAGAACCGTTGCCGTCGCGGAGGAGGGGGACACGCGAGAGGGAGCCGTCACGGTGGTCGCCATCGTCGCTGTTGAGTACATGTTCATGCTTTTTCAGAACCGATGGAAGGAGAGAACCGCAGTACCCCCAAGTTCCTGAAAACAAGGTTACTCGCAAGAGTTTTTTTCTGCTGCAGCAGATTCCATTCATTCAGTCTTATGCTGGAGATGTCAATCAAGTTATCCACATTTTTGACGGAAACCTTTTACCCGTTAATGGCGACGATGATCTGGGAAGAGCATACAGGCAACAAATGGAGAATGAAACCAAAGAGCTTTTCGGCTCATTTCGTGTCTTCTGCAATAGAAAAAATATACAATGCAAAGAAATCTTGCTGGAAGACACGGATATACCTAAGGCGATAATAAATAGCATTACATCATATTCCATTGAACTTTTAGTACTTGGATCATCAAAGAGCAGCTTTCTCAAAAAAATCAGGGGTGCGGAGGTTCCAAACCAAGTATCGAAAGGGGCACCACCATTCTGCACTGTGTACGTTATTAACAAAGGAAAAATCTCAACTGTGAGATATGCAACTGCTCAATTAACTGTTAGACCCCGTAACAGCATATTGCCGCTGCACTCTACTCAGTCTCCGTCTCCGTCTGAGTCTTACTCTGAGTCTCAGTTCTTCAGTGCTGAAAGATTCGATTCGCGGCTGACACGCAACCACCCTCCACGACCACTGGAGAAACCTGGATACCATGGACGGCAGTCCTTGGAGGACTTCTCAAGCCCAATCAACAAACTTGGTAGACCAGAGGCCAAACCATATGAACCGTCGATGACTCAATGCGATATCTCATTCGTGAATGGAAAGCCAGGGGTTGATAAGTTGTTCTCTTCATTGTATGACGAAAGTGTGGACGATGGAGCTCCCCCTCGTCTTTCTTTGGGATCCGACTTTGGAGTTAACCTTCTCGACTGCGCTTTCACTTCACAAGAGACAGCTAATTTTAGCGACGGATACTCTTTTAATTCACAGGACAGTGGAGCATCATCAAGCCTAGCTATTTTGGATGAAGTGGAAACTGAAATGAGAAGACTTAAGCTAGAACTTGAGCAGTCAATGGATGTGTATAGCACAGCATGCAGGGAGGCTTTGGTAGCAAAGCAAAAGGCATTGGAGCTTCGTAATTTGAAAATGCGAGAATGGAAGAAGTTTCACGGGGAGCAAACTGCTGAAAAAGCAGAGTTGGAATTAGCTACTAAGGAGAAAGAAAAGTGTAGAGCAGCCTCGAATGCAGCGGAAGTATCTAGAAAAATAGCAGAGTTGGAAGCTAAGAAAAAAATGAATTGTGGGATGAGAATGAGAGCAGAAGCGGAGCTAAAGCAGTCGGGAGAGGGTTTGTTATACGGGGGTTCTGCGAGGTATAGAAGATACACGGTTGAGGAAATTGAAGCAGCGACAAAAGGCTTCTCCAACGCTCTCAAGGTGGGTGAAGGAGGTTATGGGCCAGTGTATAAGTGTGAACTAGATCACACACTAGTTGCAATCAAAGTACTTAAGACAAATGCATCTCAAGGATGGTCACAGTTTCACCAAGAGATTGAGGTGCTAAGCTGCATAAGGCATCCACACATGGTTCTCCTGCTGGGAGCGTGTCCGGAGATTGGATGCCTAGTGTACGAGTACATGGCTAATGGAAGCTTAGACGATTGCCTGTTCCACAGAGGCAATGCACCAGTGCTCCCATGGCAGTTAAGATTCCGAATTGCTGCAGAGATTGCAACTGCCCTTCTTTTCCTCCACCAGACAAAGCCGGAGCCACTGGTGCACCGTGACTTGAAACCTGGAAACATTTTGCTTGATCGCAACCTGGTGAGCAAGATTGGTGACGTCGGGTTAGCGAGGCTTGTCCCTCCTTCGGTTTCAGACGTTGTCACACAATATAGACTCACATCAACTGCAGGAACTTTCTGCTACATTGATCCTGAGTACCAGCAAACAGGGATGCTTGGAGTCAAGTCTGATATTTACTCACTGGGAGTCATGCTTCTTCAGATCATAACTGCAAGGTCACCAATGGGTTTGACTCATCAGGTTGCGAAAGCCATTCAGAGAGGCACTTTTGCTGAAATGCTTGACCCTGCTGTTGAGGACTGGCCAATTCAACATGCCTTGCATTTTGCAAAGATTGGCCTCAGATGTGCAGAGATGAAAAGAAAAGATAGACCTGATCTTGCAAAAGTTGTATTGCCTGAGTTAAACAAGCTCAGACAGTTTGCTGAAGAAAACACGCCTATGATGATGTTTGGTGTTGGCGCAGGATTCGCTTCTCGCTCTACAACAACTTCCTTATTTCAAGACACCAGTGAAACTCAATCGTTCTCTGAAATCTCTGAAAGTAGCCTCTCAAGCACGCCCTCAATCGAGAAAATTGAAAGTTCCGGGCTTGAGGCGGAAGTTACACTTGGCATGCGCTTTTAA 2616 0.4694 MREEEPSPNASPPLEELRASPSPRRGKRSCSCRVSHCRASWLLMREPREPLPSRRRGTREREPSRWSPSSLLSTCSCFFRTDGRREPQYPQVPENKVTRKSFFLLQQIPFIQSYAGDVNQVIHIFDGNLLPVNGDDDLGRAYRQQMENETKELFGSFRVFCNRKNIQCKEILLEDTDIPKAIINSITSYSIELLVLGSSKSSFLKKIRGAEVPNQVSKGAPPFCTVYVINKGKISTVRYATAQLTVRPRNSILPLHSTQSPSPSESYSESQFFSAERFDSRLTRNHPPRPLEKPGYHGRQSLEDFSSPINKLGRPEAKPYEPSMTQCDISFVNGKPGVDKLFSSLYDESVDDGAPPRLSLGSDFGVNLLDCAFTSQETANFSDGYSFNSQDSGASSSLAILDEVETEMRRLKLELEQSMDVYSTACREALVAKQKALELRNLKMREWKKFHGEQTAEKAELELATKEKEKCRAASNAAEVSRKIAELEAKKKMNCGMRMRAEAELKQSGEGLLYGGSARYRRYTVEEIEAATKGFSNALKVGEGGYGPVYKCELDHTLVAIKVLKTNASQGWSQFHQEIEVLSCIRHPHMVLLLGACPEIGCLVYEYMANGSLDDCLFHRGNAPVLPWQLRFRIAAEIATALLFLHQTKPEPLVHRDLKPGNILLDRNLVSKIGDVGLARLVPPSVSDVVTQYRLTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLLQIITARSPMGLTHQVAKAIQRGTFAEMLDPAVEDWPIQHALHFAKIGLRCAEMKRKDRPDLAKVVLPELNKLRQFAEENTPMMMFGVGAGFASRSTTTSLFQDTSETQSFSEISESSLSSTPSIEKIESSGLEAEVTLGMRF* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1829 871 Gene3D Transferase(Phosphotransferase) domain 1 608 813 - -
Amo03g1829 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Amo03g1829 871 ProSiteProfiles Protein kinase domain profile. 535 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1829 871 CDD STK_N 134 232 - -
Amo03g1829 871 Gene3D Phosphorylase Kinase; domain 1 513 607 - -
Amo03g1829 871 MobiDBLite consensus disorder prediction 278 321 - -
Amo03g1829 871 MobiDBLite consensus disorder prediction 832 854 - -
Amo03g1829 871 Gene3D HUPs 118 229 IPR014729 -
Amo03g1829 871 SMART serkin_6 535 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1829 871 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 132 853 - -
Amo03g1829 871 SUPERFAMILY Protein kinase-like (PK-like) 517 794 IPR011009 -
Amo03g1829 871 Pfam Protein kinase domain 539 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1829 871 Coils Coil 401 421 - -
Amo03g1829 871 MobiDBLite consensus disorder prediction 1 31 - -
Amo03g1829 871 MobiDBLite consensus disorder prediction 279 299 - -
Amo03g1829 871 PANTHER OS02G0152300 PROTEIN 132 853 - -
Amo03g1829 871 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 123 230 - -
Amo03g1829 871 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1829 Amo-Chr3 57094451 57101912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1829 148 816 Receptor kinase-like Gene Family AT5G35380 53.402 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo03g1829 Pkinase 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1829 - - adu:107479882 1618.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3196 13 96650988 96654335 Amo03g1829 03 57094451 57101912 hybridization