Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1821 ATGGAGGTCGCCTTTCCTTCCTCCGCACCGCCATTCTCTGCCCTCCTCCCTCGTCATCTTGCTCAATCTTCCACCACCTTCAAAGTCCTCACTGCATGCATATGGCTCAATGCACGTTTTGACTGTGCCGTTGCCGCCGCGAGAAGAGCACTCAACCGCAACAAAGGCAACGACTGGCCTTCTGCTTTCGGCGCTCACCGAGCCCGCTATCTCCGCGCCATCGTTGCCAAGGTCGTGGAGAGAAAGGATCACCTCGCTAAGCTTGAATCCCTTGATTGCGGAAAACCACTCGATGAAGCTGCCTTGAACATGAAGGCACCCGTTTCTCTTCCCATGGAAACTTTCAAGAGTTATGTCTTCAAAGAACCCATTGGTGTTGTTGGATTAATCACCCCATGGTATTTTCTTTTTCTTCTCTTTAAAATTTGCCTTATTAACTGGTGTTAG 447 0.5011 MEVAFPSSAPPFSALLPRHLAQSSTTFKVLTACIWLNARFDCAVAAARRALNRNKGNDWPSAFGAHRARYLRAIVAKVVERKDHLAKLESLDCGKPLDEAALNMKAPVSLPMETFKSYVFKEPIGVVGLITPWYFLFLLFKICLINWC* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1821 148 Pfam Aldehyde dehydrogenase family 39 139 IPR015590 GO:0016491
Amo03g1821 148 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 105 139 IPR016162 GO:0016491
Amo03g1821 148 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 38 104 IPR016162 GO:0016491
Amo03g1821 148 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 40 104 - -
Amo03g1821 148 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 104 139 - -
Amo03g1821 148 SUPERFAMILY ALDH-like 39 139 IPR016161 GO:0016491
Amo03g1821 148 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 40 104 - -
Amo03g1821 148 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 104 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1821 Amo-Chr3 56090291 56090947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1821 41 139 Aldehyde Dehydrogenase Gene Family AT1G74920 60.833 3.20e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1821 K00130 - aip:110265331 143.28