Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1749 ATGCCTTCTTTGGAGGTTTATATTTATTTGTCATTTTGGCCTAGTTCTACCTACTTCATATCCAGATTTTGTCCATTTTATCCAGGGTCATCAGCAAGCCGTCTTCATGAACTGTTTATACACCAGTTTTGTGATGCTCACACCTGCTCAGGGAAACAGAAGCCTTTCTCTAGAGGAGGCAAGGAGCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTTCTTCCTGTGTTCTATCTTTTTCTTTATCTTGTTCAAAGTGATATGAAGGGTCAAACACAGGAGCTTTGTCGCATCTCAAAAGCAGGATGGAAAGTCAAGCCGTCATGA 342 0.4269 MPSLEVYIYLSFWPSSTYFISRFCPFYPGSSASRLHELFIHQFCDAHTCSGKQKPFSRGGKEQSSFFRLAAGALILVLLPVFYLFLYLVQSDMKGQTQELCRISKAGWKVKPS* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1749 113 PANTHER ZINC FINGER PROTEIN-RELATED 25 113 - -
Amo03g1749 113 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 25 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1749 Amo-Chr3 49555053 49557493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1749 25 113 C2H2 Transcription Factor Family AT5G63280 57.303 2.06e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1749 - - ahf:112715682 147.517