Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1728 ATGTCTCTTCTATTAAGACGACCGCCAGGTCGCGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCACGTCTTTTGGAAAGAGCCGCTAAATCAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTGCCAATAGTTGAGACCCAATCGGGAGATGTTTCGGCTTATATTCCTACAAATGTGATTTCTATTACAGATGGCCAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCTGCGATTAATGTGGGTATTTCGGTTTCCAGAGTTGGATCTGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTGGAATTGGCGCAATTTTCGGAATTAGAAGCTTTTGCACAATTTGCTTCTGATCTCGATAAAGCTACTCAAAATCAATTGGCAAGAGCTCCTCTCACTGTAAGGAAATTTCTCGTTGAATTACGTGCTTACTTAAAAATGAATAAACCTCAATTCCAAGAAATAATAAATTGGAATTCGAGTTAG 519 0.3873 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFSELEAFAQFASDLDKATQNQLARAPLTVRKFLVELRAYLKMNKPQFQEIINWNSS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1728 172 ProSitePatterns ATP synthase alpha and beta subunits signature. 83 92 IPR020003 GO:0005524
Amo03g1728 172 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 141 - -
Amo03g1728 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 98 IPR027417 -
Amo03g1728 172 Gene3D - 1 168 - -
Amo03g1728 172 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 100 166 - -
Amo03g1728 172 Pfam ATP synthase alpha/beta chain, C terminal domain 99 140 IPR000793 GO:0015986
Amo03g1728 172 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 141 - -
Amo03g1728 172 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 92 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1728 Amo-Chr3 49211350 49211977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1728 9 105 Primary Pumps ATPases(2) AT4G38510 34.021 1.74e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1728 K02111 - rcu:11542288 290.041