Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1723 ATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAATGTAGCAATGGCATGATAATACAATATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCACCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGATAAATTAA 312 0.3622 MCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKCSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAITRELRQLNFTKIVSLAPEIN* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1723 103 Hamap 50S ribosomal protein L14 [rplN]. 2 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo03g1723 103 Gene3D Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Amo03g1723 103 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 1 102 - -
Amo03g1723 103 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 102 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo03g1723 103 SMART Ribosomal_L14_2 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo03g1723 103 Pfam Ribosomal protein L14p/L23e 1 102 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo03g1723 103 SUPERFAMILY Ribosomal protein L14 1 102 IPR036853 GO:0003735|GO:0005840|GO:0006412
Amo03g1723 103 TIGRFAM rplN_bact: ribosomal protein uL14 1 102 IPR005745 GO:0003735|GO:0006412|GO:0015934
Amo03g1723 103 ProSitePatterns Ribosomal protein L14 signature. 41 67 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1723 Amo-Chr3 49201018 49201374 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1723 14 99 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.047 3.22e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1723 K02874 - csin:14412462 183.726