Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1709 AAATCAAAGAAAAAAGTCTGTAAAAGTTTTAATGACAGAAAACAGACAGAGATTAGCACTCAGCCTCATTCCAGGTCCGTGACGTTCGCTGTTGTGTGGGTGGCTATCGACGTCGAAGCCCCCTTCGATCTGAGATGGAAAGCCATGGAGAAGGCAGTTGATTTCTCCGTCCAATGGACTGATGGATGGAGCATGGAATCAACAGATGATGATGAAGGAAGTGTTGCACAGTCACTAGAGACAGAGGAAGGGCAATCGGTAGCGGGGGATAGAGAAGATGGTTCAGTGGCTGGTGATGAGGGTTCCATGCCGGTACCAACAGGAATACACGTTGTGGCTGACAATCCATATGGTGACGAAGAATTGGGATTAACGGTTTTAATTGCCACCGCATTGGAATCAGCCGAGTATAATAGTGTGGAAGAAGCGTATAAAGCATCTGTGGCTTTTACGAAAGCGACTGGATTCGCTGTACGAAAGGGTGATTCTGTGAAAAATGAGGAAGGGAATATCGTGCGGAAGTTATTTTATTGCAATCGACAAGGTTTGCATGAGAAGAAGCACTATGAGAGGGTCAATAGGAAGAGGGCTCATAAAGCAGAGACTAAAACCTATTGTTATGCCAAGTATGTTGTATACTTGGACATGAGTTCTAGAAAGTGGAGGATGAAAACGTTTATTGTGGATTATAGTCATGATTTGGCCCCACTAGATTTCACCAACGTAATGGTGCCGCATCGGAAGCTGACTGATGGAAATAAAGCTCACATACACAGCATGCAAGAGGCTGGATTCCAGACAACTCAAATCATGGGGTTCTTTGCTCACTTGTGTGGTGGATATCGGAATGGTATCAACTCATCATTAAAGAAATTTATAAAATCTGAAAATTGCCTGCTTGAGCTGGTAGAGAACCTGGATCGTGTTGTTAAAGATTACCGCAACAACGAGTTCATTGTGGACTACAAGTCATTGTATACTGATCCTGTGCTGACGACCGGATTGGAGTCTCTTGAGCGGTTGGCTAGTAAGTTGTACACAAGGAAAATATTCTTCGAGGTAAAGAAACAAATCGAGAGTGTTGGTGGGATGATTGTACTATACAAGGATAGGTTTGGTAGCATTGAGAAGTTTATGCTGAGGAAGTTTAGAAAGCCACATCGTGTCCATGTGGTGCTATATGATAAGAGTTCTGACAAGTTCGAGTGTTCATGCAAGTTGTTGAATAGTGTAGGTATTCTTTGTGGTCACATATTCTGCGTTCTAAAAGAGCTGGACATAGAAGAGTTGCCCAATCGATTGGTTCTTAAGAGGTGGTGTAAAGATGCCAAATCCGATATAATTAGCACAATAGAGGTCCAGTCAGATCTGGACCGGGCATTTCGTATTAGGTACGCACAGGGTTCAGAAACCTACAAAAAAGTGGTGAATATAGTTGCGAAGATGTCAAACGAGTTAGAGTCCATGTGCTACATAGGCGACAAGGGTGGACATGCACATCTTGTTGGAAATGACATTGACTTTGGAAATCCTCATATCATAAGGTCAAAAGGTGCTCCTCGAGGCAACACTAATGCAAAGAATGGGAGACGTTGCAGAAGGAATCAGTTTCTAGGTCGAGGAGAAGCCAGAGCCGTGGCTGGAAAAGGGGCCGGGATACATAGTATTTGCAAAATCAATGTGGGGTTAAAGTGGTTAAGTTCACTGCTTCACTTGGAAAGGCATTTGGTATTGTTTGATAGGGAATTTGTTGAATTTTTGGCTTAA 1767 0.4312 KSKKKVCKSFNDRKQTEISTQPHSRSVTFAVVWVAIDVEAPFDLRWKAMEKAVDFSVQWTDGWSMESTDDDEGSVAQSLETEEGQSVAGDREDGSVAGDEGSMPVPTGIHVVADNPYGDEELGLTVLIATALESAEYNSVEEAYKASVAFTKATGFAVRKGDSVKNEEGNIVRKLFYCNRQGLHEKKHYERVNRKRAHKAETKTYCYAKYVVYLDMSSRKWRMKTFIVDYSHDLAPLDFTNVMVPHRKLTDGNKAHIHSMQEAGFQTTQIMGFFAHLCGGYRNGINSSLKKFIKSENCLLELVENLDRVVKDYRNNEFIVDYKSLYTDPVLTTGLESLERLASKLYTRKIFFEVKKQIESVGGMIVLYKDRFGSIEKFMLRKFRKPHRVHVVLYDKSSDKFECSCKLLNSVGILCGHIFCVLKELDIEELPNRLVLKRWCKDAKSDIISTIEVQSDLDRAFRIRYAQGSETYKKVVNIVAKMSNELESMCYIGDKGGHAHLVGNDIDFGNPHIIRSKGAPRGNTNAKNGRRCRRNQFLGRGEARAVAGKGAGIHSICKINVGLKWLSSLLHLERHLVLFDREFVEFLA* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1709 588 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 132 259 - -
Amo03g1709 588 ProSiteProfiles Zinc finger SWIM-type profile. 389 426 IPR007527 GO:0008270
Amo03g1709 588 Pfam FAR1 DNA-binding domain 149 235 IPR004330 -
Amo03g1709 588 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 273 467 - -
Amo03g1709 588 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 273 467 IPR031052 GO:0006355
Amo03g1709 588 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 259 IPR031052 GO:0006355
Amo03g1709 588 MobiDBLite consensus disorder prediction 64 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1709 Amo-Chr3 48818558 48824043 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g1709 FAR1 8.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1709 - - adu:107479516 542.732