Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1707 ATGGAGGATGTGGACCTTGACGGTGGCGGTGGCAGTGGTCGCAAGTATCGGCCTGTGTTGGACAGCGATCGTGCGGTGCTTGAGATGTCTTCAATGGATCCTGGATCCTCTTCCGCTGCTTCTTCTTCTCAACCGTTTCGGGATCAACCTCCTCCTAATCTCAGAAAAATAAACGTGGGTAATGGTGCTACTGAGGCTTCTAATGCTAAAGAAGGGAACAACTCTCCTAGTCAGCCACAGCCTAATGGATCCCATCAAGAATCAAAGCTTGAACTGTTTGGTTTTGATTCCCTTGTCAATATACTTGGTCTTAAAAGCATGACTAGTGAGCAAGCTGTGCAACCATCTAGTCCTAGAGAAGGCGAAGATATTTCTATCACTGTAGGGGAGCCAAAGCCTGCTGCTCCCAAGCTGGGTACAATGATGGGTGTATTCATTCCATGCATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGAATGGCTGGCATAGGAGAGTCATTTCTGCTTGTTGCTTTGTGTGGCTTGTGTACTTTTCTTACATCAATATCATTGAGTGCCATTGCGACTAATGGTGCTATGAAGGGAGGGGGRCCATACTATCTAATAGGKCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTATATGTTTCTTCCTTGGGAATGCTGTTGCTGGAGCACTTTACGTATTGGGAGCTGTGGAAACATTTTTGAAAGCAGTTCCTAAAGCTGGGATTTTTAGAGAGACTGTCAGCCATGTTAATGGTACTGCAGTGACACCAATAGAAGCTCCAAGTTCTCATGATCTGCAAATTTATGGGATTGTTGTGACCATTCTTTTATGCTTTATTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCACCTGCATTTCTCGTTCCTGTTTTATTCTCAGTCATCTGCATATTCTTGGGAATGTTTGTGGCTAAGAAGGATAAACCTTCAGAGGGATTTACTGGTTTGAGTTGGGAGACAATTAAAGATAATTGGAGTTCAGATTATCAAAAAACTAATGATGCTGGAATCCCAGAAACTGATGGCCATGTAAGCTGGAATTTCAATTCATTAGTAGGCCTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGGTTCTAATAGATCAGCTTCTCTAAAAGATACTCAGCGATCAATTCCTATTGGGACATTATCTGCAACACTTATTACTACTTCTCTGTATTTTATTTCTGTGTTATTTTTTGGCGCTGTTGCCACCAGAGAGAAGCTTTTAACAGACAGGCTACTAACGGCTACAGTTGCCTGGCCTTTCCCTTCACTAATTAAAATTGGGATTATTCTTTCAACTTTGGGTGCTGCTCTTCAGAGTCTGACCGGTGCCCCACGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTCTGCGCTACTTTAAAGTTGCAGATGGCAGTGAGCCTTATGCTGCTACCCTTTTCACTGCTATCCTATGTGGTGTGTGTGTCATTATTGGGAATCTGGATCTTATCACTCCAACTATAACTATGTTTTTCCTTCTRTGTTATACGGGTGTCAACTTGTCCTGCTTCCTTCTTGATCTTCTAGATGCTCCTAGTTGGCGACCTCGTTGGAAATTTCATCATTGGTTTCTCTCTCTTGTTGGAGCATTACTTTGCATTGTGATTATGTTCCTGATCTCGTGGTCATTCACTGTGGTGGCTTTGGCCCTTGCAAGTCTTATATATAAGTATGTGGGCCTCAAAGGAAAGGCTGGCGACTGGGGAGATGGTTTCAAAAGTGCATATTTCCAACTAGCACTTCGGAGCCTTCGATCACTAGGAGAAAACCAAGTACACCCAAAGAATTGGTATCCAATTCCACTCGTGTTTTGCCGGCCCTGGGGTCAACTACCAGAAAATGTTCCATGTCATCCCAAACTTGCAGATTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGTCTATATTTGTCTCTATACTGGATGGWGACTACCATGAATGTGCTGAAGATGCCAAGACTGCTTGTAAACAGCTCAGTACCTACATTAATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTCGCCCCTAATATGTCTGAAGGCTTTCGTGGTATCGTKCAGACAATGGGCCTTGGGAATCTCAAGCCAAACATTGTGGTGATGCGCTACCCAGAGATCTGGCGTCGGGAGAACTTAACAGAAATCCCCAAGACATTTGTTGGGATAATTAAYGACTGCATTGTTGCAAACAAGGCRGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCCAATGAGTACCAGAAGCAGTACGGCACGATTGACCTCTACTGGATTGTGAGAGAYGGTGGTCTCATGCTGCTGCTCTCTCAGCTGCTTCTTACCAAGGACAGCTTTGAGAGTTGCAAAATTCAGGTTTTCTGCATTGCAGAAGAGGATGCAGATGCAGAAGTGCTGAAAGCTGATGTGAGAAAATTCCTTTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATTCCCATTTCTTCACAAGAAAATGGTGGGTCTCCCCAGGATGAGTCACASGATGCATTTAAAGGTGCTCAACAAAGAATTGATGATTATCTAAACAAAATGAAGGCAGCAGCAAAGAAAGATGGCACCCCTCTAATGGCAGATGGTAAGCGCGCAGTTGTGAATGAGCAGCAGGTCGAGAAGTTCCTGTTCACAACGCTTAAGCTCAATTCAATAATGTTGAGRTACTCAAGAATGGCTGCTGTTGTTTTGGTAAGTTTGCCTCCACCTCCACTGAACCACCCAGCATATTTCTATATGGAGTACATGGATATGTTGCTGGAAAATATACCGAGGATTTTAATTGTAAGAGGATACCGTAGAGACGTTGTMACTCTATTCACATAG 2946 0.4328 MEDVDLDGGGGSGRKYRPVLDSDRAVLEMSSMDPGSSSAASSSQPFRDQPPPNLRKINVGNGATEASNAKEGNNSPSQPQPNGSHQESKLELFGFDSLVNILGLKSMTSEQAVQPSSPREGEDISITVGEPKPAAPKLGTMMGVFIPCIQSILGIIYYIRFSWIVGMAGIGESFLLVALCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGICFFLGNAVAGALYVLGAVETFLKAVPKAGIFRETVSHVNGTAVTPIEAPSSHDLQIYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLFSVICIFLGMFVAKKDKPSEGFTGLSWETIKDNWSSDYQKTNDAGIPETDGHVSWNFNSLVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLSATLITTSLYFISVLFFGAVATREKLLTDRLLTATVAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPILRYFKVADGSEPYAATLFTAILCGVCVIIGNLDLITPTITMFFLLCYTGVNLSCFLLDLLDAPSWRPRWKFHHWFLSLVGALLCIVIMFLISWSFTVVALALASLIYKYVGLKGKAGDWGDGFKSAYFQLALRSLRSLGENQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKTACKQLSTYINYKNCEGVAEIVVAPNMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPKTFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKDSFESCKIQVFCIAEEDADAEVLKADVRKFLYDLRMQAEVFVIPISSQENGGSPQDESXDAFKGAQQRIDDYLNKMKAAAKKDGTPLMADGKRAVVNEQQVEKFLFTTLKLNSIMLRYSRMAAVVLVSLPPPPLNHPAYFYMEYMDMLLENIPRILIVRGYRRDVVTLFT* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1707 981 MobiDBLite consensus disorder prediction 31 49 - -
Amo03g1707 981 Pfam Amino acid permease 143 613 IPR004841 GO:0016020|GO:0055085
Amo03g1707 981 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 10 980 - -
Amo03g1707 981 Pfam Solute carrier family 12 652 773 IPR018491 GO:0006811|GO:0016020|GO:0022857
Amo03g1707 981 Pfam Solute carrier family 12 784 980 IPR018491 GO:0006811|GO:0016020|GO:0022857
Amo03g1707 981 MobiDBLite consensus disorder prediction 60 87 - -
Amo03g1707 981 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 10 980 IPR004842 GO:0006811|GO:0015377|GO:0016021
Amo03g1707 981 Gene3D Amino acid/polyamine transporter I 136 599 - -
Amo03g1707 981 MobiDBLite consensus disorder prediction 110 130 - -
Amo03g1707 981 MobiDBLite consensus disorder prediction 1 87 - -
Amo03g1707 981 Coils Coil 873 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1707 Amo-Chr3 48745071 48762818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1707 138 981 Inorganic Solute Cotransporters AT1G30450 82.763 0.0 1433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1707 K14427 - gmx:100795205 1625.14