Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1646 ATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTACTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATTAGGAACTTAAATGTGAATTTGTTCAGAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCCAAATTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATAAAGGAAACAGCCTCTATTTTGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGGTCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCTCAGAACATACGTTACACTGTATCTCTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTATACTGTAAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAAGGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCCTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCCGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGTTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTGTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTTTTCAGAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCATCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTGGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAAGTACCCGAGTTGCCGGCACTATTGGATATATGGCACCAGAATATGCACTATGGGGCTATCTTACATACAAAGCTGATGTTTACAGCTTTGGGGTTGTGGCCTTAGAAATTGTTAGCGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCTTGCCAATTGCACAAAAAACAGAACTTGGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTAAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCGTGCAGCTATTCCGGATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCTTTAAGAGACTTCCATCAACATAAACCAAAACTGGGTTTGAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA 2085 0.388 MRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFTWQGPEQPACQEDIRNLNVNLFRSSMMKNKLEEYVPCQINFNCPRYSSCLHVNCGGKDIQVKDNKGNSLYFGDGEVAGGTATYFYSSSGQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRKDFDIENETHAAVKPLVVPIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVVSDSRTCSNDGKKVPVSVIIASVAGALCFILLLFGFIWWKGFFRRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNHLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGRAAIPDMVPDPSSCNEDLRFKALRDFHQHKPKLGLSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1646 694 SUPERFAMILY Protein kinase-like (PK-like) 331 618 IPR011009 -
Amo03g1646 694 MobiDBLite consensus disorder prediction 652 675 - -
Amo03g1646 694 Gene3D - 80 277 - -
Amo03g1646 694 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 52 640 - -
Amo03g1646 694 Gene3D Transferase(Phosphotransferase) domain 1 422 625 - -
Amo03g1646 694 MobiDBLite consensus disorder prediction 651 675 - -
Amo03g1646 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Amo03g1646 694 Pfam Malectin domain 82 270 IPR021720 -
Amo03g1646 694 CDD STKc_IRAK 352 619 - -
Amo03g1646 694 ProSiteProfiles Protein kinase domain profile. 346 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1646 694 SMART serkin_6 346 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1646 694 Gene3D Phosphorylase Kinase; domain 1 316 421 - -
Amo03g1646 694 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED 52 640 - -
Amo03g1646 694 Pfam Protein tyrosine and serine/threonine kinase 349 617 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1646 Amo-Chr3 45107664 45114074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1646 1 512 Receptor kinase-like Gene Family AT1G29750 60.234 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo03g1646 PK_Tyr_Ser-Thr 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1646 - - qsu:111995633 971.844