Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1620 ATGTCCTCATCGTTGTCGCAATCAAGCTTCTACATCAAACGCATGAATCTCACCGCAGTCAAAGACGCCGACGAAGTCATGGAGAGGCACGTCGAGGACTCGCTCGCGATCCTCCTTCCTCTTAGGGATTGCTACCGCACGCGCTACGGCGACACTCCGTCACATGAGAAGCTTAGCCTCGTAGACATTGGAACAGGTGCTGGTCTTCCCAGAGTTGTTTTGGCCATAGCTTGTCCAGAATGGGAAGTTACGCTGATAGAGTCCATGAACAAGAGATGCGTATTTTTGGAGCATGTTGTTGGAATCATCGGTTCATCAAATATCCAGATAGTAAGAGGAAGAACAGAGGACACTTGGTTCACTGAAAATTCTCCAAACATCAAGAACAAGGTAATTGCGGTGGCTGTTGGAGATTGGTATTTCGACCGCGCAGGTGTGAAGGTGATTGATTGTCCTTACCCTTGTGATAACACCTGTCACCATCTCGATGAGATGGCGGGTGTAATCTCCGTTAGAAGCAAACAGCGAATGCCACTACAGTTGAAAGAAGGATTCAGCAAGACAAGAGACTTCAGTATAAATTTCCAGGGTTTATTAGAGCCAGAGGTTCTTGGACCAGGATCAAATGCAAATTATGCCTGGGATGATCTGACTCTTCCACATAGGCTGGTTGTTCGCATCAATGGTGCTCATTTGATCTTCTTTACCCCTTCCTACAATTAA 723 0.4661 MSSSLSQSSFYIKRMNLTAVKDADEVMERHVEDSLAILLPLRDCYRTRYGDTPSHEKLSLVDIGTGAGLPRVVLAIACPEWEVTLIESMNKRCVFLEHVVGIIGSSNIQIVRGRTEDTWFTENSPNIKNKVIAVAVGDWYFDRAGVKVIDCPYPCDNTCHHLDEMAGVISVRSKQRMPLQLKEGFSKTRDFSINFQGLLEPEVLGPGSNANYAWDDLTLPHRLVVRINGAHLIFFTPSYN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1620 240 Pfam rRNA small subunit methyltransferase G 13 120 IPR003682 GO:0005737|GO:0006364|GO:0008649
Amo03g1620 240 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 124 IPR029063 -
Amo03g1620 240 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 4 226 IPR003682 GO:0005737|GO:0006364|GO:0008649
Amo03g1620 240 Gene3D Vaccinia Virus protein VP39 10 139 IPR029063 -
Amo03g1620 240 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 13 122 IPR003682 GO:0005737|GO:0006364|GO:0008649
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1620 Amo-Chr3 44464452 44467553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1620 101 162 Carbohydrate Esterase AT1G57590 59.677 2.19e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1620 K03501 - gmx:100818428 158.688