Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1619 ATGCACGCACCGTCTCTGCCTTGCGCTGTTGTTGTTGTTTCTACCTTGCGCTGCCAGATCCGCCACTGCTATAATCCCTCTTCTCTGCTCGCCGTCGTCGTGTTTCTCATTACTCGAGCTCGCGCCTTGTTCTACTCTGCTCCGTCGCGTTTTTCTGCTCGCGCCGTTCTAAAACCTTTGCTCTGCTCCACTTTCGAGTTCGATCATGTCGAAGGACAAAGACTTTACCGATTTGTCGCTCACCTTCAAATACCTCTTAGCAGCAATCGAACTCTAAAGCCCATGACCGACTCTGTCCATCTCCGCTGCAAACAAAAGCACTTACTTGTCTGGTCTGATTTTCATGTAAGAGACGGCATTGCCATATACATTTACAAACCTTATAAAAGAATGAAAATTGATGCTAGAAGAAAGGCAGAGGTATCAAGCAATTATAAGAGCCAATTTCTTGCAAACATGAGCCATGAATTGAGGACACCTATGGCTGCAATAATTGGGCTACTCAACATTCTTATGTCCGACGACTGTCTAACCAACGAACAGTGTGCAACGGTTACTCAGATAAGAAAATGCTCGACGGCGCTGCTACGGCTTCTTAATAAACATCTTGGATCTTAG 618 0.4579 MHAPSLPCAVVVVSTLRCQIRHCYNPSSLLAVVVFLITRARALFYSAPSRFSARAVLKPLLCSTFEFDHVEGQRLYRFVAHLQIPLSSNRTLKPMTDSVHLRCKQKHLLVWSDFHVRDGIAIYIYKPYKRMKIDARRKAEVSSNYKSQFLANMSHELRTPMAAIIGLLNILMSDDCLTNEQCATVTQIRKCSTALLRLLNKHLGS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1619 205 Pfam His Kinase A (phospho-acceptor) domain 146 201 IPR003661 GO:0000155|GO:0007165
Amo03g1619 205 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 133 202 IPR036097 GO:0000155|GO:0007165
Amo03g1619 205 PANTHER TWO-COMPONENT HISTIDINE KINASE 133 202 - -
Amo03g1619 205 Gene3D - 126 204 - -
Amo03g1619 205 CDD HisKA 146 200 IPR003661 GO:0000155|GO:0007165
Amo03g1619 205 SMART HisKA_10 145 204 IPR003661 GO:0000155|GO:0007165
Amo03g1619 205 PANTHER OSMOSENSOR HISTIDINE KINASE 133 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1619 Amo-Chr3 44459121 44460925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1619 132 203 Histidine Kinase Gene Family AT2G17820 84.722 6.07e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1619 - - adu:110279847 231.491