Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1570 ATGGCCAAAGGTGGAGGAAAACTAATGAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCATTCGGCAACATCACCACCACCACCACCACCAATAAGCAGAGCCGTTGCGGCGCCACCGTGAGCGCCGTAGCTAACAACGAACAATCCTCCGTGTCGGAAGCCGATTTCCAGCCAGTGTATGTGGGGAAGACGTTGCGGAGATACTTGGTGAGGCCGGACGTGGTGGAGCATCCACTTTTCCGAGAGCTCGTGGATAGATCACGTGAGTCCTACGACGACAACAACTTCGTCGTCGTGGAGGAGGACACTGTCCACGTGGCATGCGAGGTCGTGCTGTTCGAGCACCTGCTTTGGATGCTAGAAAACGCTGATCCTCAACCTGAGTCACTCGACGAGCTCGTCGAATTCTATACTTGCTAG 420 0.5405 MAKGGGKLMKLKSVLKKWNSFGNITTTTTTNKQSRCGATVSAVANNEQSSVSEADFQPVYVGKTLRRYLVRPDVVEHPLFRELVDRSRESYDDNNFVVVEEDTVHVACEVVLFEHLLWMLENADPQPESLDELVEFYTC* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1570 139 Pfam Auxin responsive protein 15 120 IPR003676 GO:0009733
Amo03g1570 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 139 IPR003676 GO:0009733
Amo03g1570 139 PANTHER SMALL AUXIN-UP RNA-RELATED 5 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1570 Amo-Chr3 42867062 42867843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1570 4 135 Calmodulin-binding Proteins AT3G43120 25.157 4.72e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1570 - - mtr:MTR_2g044020 146.747