Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1553 ATGGCTATGTTTTATATCTCATGTTCAAGGCTCATGCCATTTTCTCTGTCAGTGCAAGATCTGATGAGACTATTCCAGTCTAGAATCATCGGATCCACCGAAGTCATCAATCAATCTTGGAGACGTTCTTTGATTGATAAAAAAAATGGAAGGTGGCACAGTTTCTCATCCTCATCCTCAACCTCAATCTCATCATCACCAAACATTTCAAGTAGCCCCAATTACAACATGATTGACAATTCTGATTACCAAGAACCCACAACTGATGATGATCCAACCTCAAAGAGTAGAGCACCGTGTAATTGTAACTTGGATGAAGAGGATCACAAATGCGAGAGCCCCGAGCCCCCTCCCGATGTTCCGAAAGGGTACTTGGCAGTTTATGTTGGGAGTGAGCTTCGGAGATTCATCATTCCAACTAGCTACCTTACTCATTCTCTCTTCAAGTTATTGCTTGAGAAGGCTGAAGATGAGTTTGGATTTAACCATAATGGTGCTCTCACTATTCCTTGTGAGACTGAGACCTTCAAGTATCTCCTCAGATGCATAGAGACCAACTACGACACCCATCAAGGTAGCTCCTGTAAGTTGATTCTCTTTCTCATCTTTTATGTATGCTCTGCTTCGCAACAACAATCTTATATCGTTAACAAAATTTATTATTTTCATCAATACGGTAAACGAGAATATTATCCATTAAAAAATGTATTCGCCTAA 717 0.4017 MAMFYISCSRLMPFSLSVQDLMRLFQSRIIGSTEVINQSWRRSLIDKKNGRWHSFSSSSSTSISSSPNISSSPNYNMIDNSDYQEPTTDDDPTSKSRAPCNCNLDEEDHKCESPEPPPDVPKGYLAVYVGSELRRFIIPTSYLTHSLFKLLLEKAEDEFGFNHNGALTIPCETETFKYLLRCIETNYDTHQGSSCKLILFLIFYVCSASQQQSYIVNKIYYFHQYGKREYYPLKNVFA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1553 238 MobiDBLite consensus disorder prediction 51 83 - -
Amo03g1553 238 MobiDBLite consensus disorder prediction 51 99 - -
Amo03g1553 238 PANTHER AUXIN-RESPONSIVE PROTEIN-LIKE PROTEIN 101 186 - -
Amo03g1553 238 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 101 186 IPR003676 GO:0009733
Amo03g1553 238 Pfam Auxin responsive protein 111 183 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1553 Amo-Chr3 42195403 42197221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1553 101 184 Calmodulin-binding Proteins AT3G43120 78.571 1.30e-44 145