LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo03g1551	ATGTCGATGGAGAAGGAGAGAGAGACCCAGGTTTACTTGGCTAAGCTTGCTGAACAGGCAGAGAGATATGAAGAAATGGTCGAATGCATGAAGAAAGTAGCGAAGCTTGATCTTGAGCTAACTGTTGAAGAGAGGAATCTCCTATCAGTTGGATACAAAAATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATAATGTCCTCAATCGAGCAGAAGGAAGAGTCTAAGGGTAATGAGCACAATGTTAAGCTGATCAAGAGCTATTGTCAAAAGGTTGAGGAGGAACTCTCAAAGATTTGCAATGACATTCTCACAATTATAGACCAACATCTGATTCCCTCTTCCACCTCAGCAGAAGCTAATGTTTTCTACTATAAGATGAAAGGTGATTATTTTCGATATCTTGCGGAGTTCAAAACTGACCAAGAAAGGAAAGAGGCAGCTGAGCAATCGCTCAAAGGATATGAAGCTGCTTCAGCAACTGCAAACACAGATCTTCCACCAACGCATCCAATCCGTCTTGGACTTGCACTCAACTTTTCTGTGTTTTATTATGAGATAATAAACTCTCCTGAAAGGGCTTGCCATTTAGCGAAACAAGCTTTTGACGAGGCAATTGCAGAATTAGACACATTGAGTGAAGAATCATACAAGGATAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTAACTCTCTGGACCTCTGACTTACCTGAGGATGGAGGTGAGGATAACGTAAAAGCTGAAGAAGCCAAACCTACTGAGACTGAGCTTATCAACAACTAA	789	0.4208	MSMEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICNDILTIIDQHLIPSSTSAEANVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPPTHPIRLGLALNFSVFYYEIINSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNVKAEEAKPTETELINN*	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo03g1551	262	Coils	Coil	13	33	-	-
	Amo03g1551	262	PANTHER	BNAC03G57490D PROTEIN	3	255	-	-
	Amo03g1551	262	Pfam	14-3-3 protein	13	235	IPR023410	-
	Amo03g1551	262	Coils	Coil	195	215	-	-
	Amo03g1551	262	MobiDBLite	consensus disorder prediction	237	262	-	-
	Amo03g1551	262	Gene3D	-	1	249	IPR036815	-
	Amo03g1551	262	ProSitePatterns	14-3-3 proteins signature 1.	45	55	IPR023409	-
	Amo03g1551	262	ProSitePatterns	14-3-3 proteins signature 2.	217	236	IPR023409	-
	Amo03g1551	262	SUPERFAMILY	14-3-3 protein	6	237	IPR036815	-
	Amo03g1551	262	SMART	1433_4	7	248	IPR023410	-
	Amo03g1551	262	PANTHER	14-3-3 PROTEIN	3	255	IPR000308	-
	Amo03g1551	262	PIRSF	14-3-3	1	249	IPR000308	-
	Amo03g1551	262	MobiDBLite	consensus disorder prediction	241	255	-	-
	Amo03g1551	262	PRINTS	14-3-3 protein zeta signature	154	180	IPR000308	-
	Amo03g1551	262	PRINTS	14-3-3 protein zeta signature	181	207	IPR000308	-
	Amo03g1551	262	PRINTS	14-3-3 protein zeta signature	208	237	IPR000308	-
	Amo03g1551	262	PRINTS	14-3-3 protein zeta signature	39	68	IPR000308	-
	Amo03g1551	262	PRINTS	14-3-3 protein zeta signature	88	112	IPR000308	-
	Amo03g1551	262	PRINTS	14-3-3 protein zeta signature	119	141	IPR000308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo03g1551	Amo-Chr3	42133757	42137412	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo03g1551	4	253	14-3-3 family	AT1G26480	86.400	2.00e-163	452

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo03g1551	-		K06630	gmx:100529129	492.271