Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1495 ATGAAGGCCAAGGAAGGTAAAATTGCCGTGGTAGTGAGAACTGTAACTGATGATATCAGAGTGTATGAAGTTCTTGCATTGAAGGTTACCACACTCATGTTTATAGAGACTGCACGGGCTAGAATAAAGAAGGTTGGTGGTGAATGCTTGACATTGGATCAACTTGCACTTAGGGCACCTCTCGAACAGAACACAGTCCTTCTTAGAGGCCCAAAGAACTCCAAGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTTCCTCACAACCATACCAAGCCTTATGTACAATCTAAGGGAATGAAGTATGAGAGGGCTAGAGGAAGGAGGAACAGCAAAGGACTTAGGGTTTAA 354 0.4463 MKAKEGKIAVVVRTVTDDIRVYEVLALKVTTLMFIETARARIKKVGGECLTLDQLALRAPLEQNTVLLRGPKNSKEAVKHFGPAPGVPHNHTKPYVQSKGMKYERARGRRNSKGLRV* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1495 117 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 116 - -
Amo03g1495 117 SUPERFAMILY Ribosomal proteins L15p and L18e 3 69 IPR036227 -
Amo03g1495 117 MobiDBLite consensus disorder prediction 72 117 - -
Amo03g1495 117 Pfam Ribosomal protein 60S L18 and 50S L18e 3 116 IPR021131 -
Amo03g1495 117 PANTHER 60S RIBOSOMAL PROTEIN L18 1 116 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo03g1495 117 Gene3D - 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1495 Amo-Chr3 38989379 38990098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1495 1 117 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 72.650 7.67e-62 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1495 K02883 - tcc:18613591 196.052