Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1481 ATGTCTAGTTCGTCGGAATACTCGGAATTTTCCGGCCAGAAGCCGGCGAGGTCACCGGAAAAATCGAGCTTCTCTCAGACTTGCAGTTTGTTGAGTCAATACATCAAAGAAAAGGGCAACTTTGGAGATCTTACCCTCGGTATCACATGCAACACCGAACCAAGTGGGTCACCTGAAACATCGTGTCAGTCTGCAACAACTATGAACCTATTTCCTACCAAAGAAAACAACGTTGCACCAAAAAGCCTCACACTCACTGGCACAGCCATGGATTTGCTCTCTCCACAAGGTGCTTATCGTGCCAATCTTCCCTCTGAAGAAATTCCAAACTTGATCAATTCCAGTGCAGTTAAGTCTGTGAGCAAGGGCCTGAAAACTGCACAATTGACAATCTTCTATAATGGTCAAGTTGTTGTGTTGGATGATTGTCCTGCTGAGAAGGCGAACGAGCTCATGGCTTTTGCCAAGAAAGGAGTCTCTCAAAGCCAGAACAACTCTGTCTACACCTACACTCAGAGCCAGCCTTCATTTCCTCCTAATTTGGCCAGAACATCTGCTGCTGATTCGAGTGTTCAAGCCTTTCCTAACGTGAATATCGTTGCTAGTTCCGGTAGCAATTCGATCCATGAGCACTCAAAACCTCAGTCCAGACCTGTTGTTTGTGATCTACCAATTGCAAGAAAAGCTTCGCTTCATCGGTTCCTGGAGAAGAGAAAGGATAGAATTGCATCAAAGGGTCCATATCAAGCAGCAAATCCCATTGGGAGCGCTAACAAGCCAGCTGAATCCATGTCATGGCTTGAGTTGGGTGCTAAATCTCAAGAATGA 828 0.4577 MSSSSEYSEFSGQKPARSPEKSSFSQTCSLLSQYIKEKGNFGDLTLGITCNTEPSGSPETSCQSATTMNLFPTKENNVAPKSLTLTGTAMDLLSPQGAYRANLPSEEIPNLINSSAVKSVSKGLKTAQLTIFYNGQVVVLDDCPAEKANELMAFAKKGVSQSQNNSVYTYTQSQPSFPPNLARTSAADSSVQAFPNVNIVASSGSNSIHEHSKPQSRPVVCDLPIARKASLHRFLEKRKDRIASKGPYQAANPIGSANKPAESMSWLELGAKSQE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1481 275 Pfam Jas motif 224 249 IPR018467 -
Amo03g1481 275 MobiDBLite consensus disorder prediction 244 275 - -
Amo03g1481 275 Pfam tify domain 126 155 IPR010399 -
Amo03g1481 275 PANTHER PROTEIN TIFY 10A-LIKE 16 261 - -
Amo03g1481 275 MobiDBLite consensus disorder prediction 1 23 - -
Amo03g1481 275 SMART tify_2 122 157 IPR010399 -
Amo03g1481 275 ProSiteProfiles Tify domain profile. 122 157 IPR010399 -
Amo03g1481 275 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 261 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1481 Amo-Chr3 38480513 38483481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1481 1 272 Tify Gene Family AT1G19180 39.273 5.64e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Amo03g1481 tify 2.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1481 K13464 - gmx:100801449 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2781 13 58482589 58485591 Amo03g1481 03 38480513 38483481 hybridization