Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1458 ATGGCCGCTGTTCGCTCTAACAACCACAACCGCCGCAGTCACGTTTTCTACGTGTTCTTGTTCATTGCTGTCTCTCTCTACAGCCTCCCACTGTCTCTCTCAGGCGACGCGGAGTCCCTTCAAAAGCTTAAACAATCCTTCACCAACGGTGATCGAGTGCTGTACACGTGGGAACCCAACACGTCACCTTGCGAAAACTGGATGGGCCTGATGTGCGTCGACGGCATGGTAATGGGCATTCGCCTCTCTGACATGGGCTTGTCTGGTACCATCAACATAGACGCTCTTGCCGAGATCCCCGGGCTCAGGACCCTAAGCTTCACCAACAACAGCTTCACGGGTCCAATCCCTGACTTCAGCAGGCTCGGCGCCATCAAAGTCCTCTTGCTCTCCTACAACCAATTCTCCGGGCCCATCCCTTCCGATTTCTTCTCCAAATTGACTTCCCTAAAGAAAGTTTGGATCGACTCGAATAACTTCTCTGGCCAGATACCCGAATCTTTGATGGAGCTAGCGCTTCTCAAAGAGCTTCACATCGAGAACAACCACTTCACCGGAAGGATACCCGCTGTGAAGGAAGATTTGACCTCGTTCAACGCATCCTACAACAACCTCGAAGGTCCTATACCGGAAGCGCTGGCTAGGTTCGGTGAGAATGCGTTTGCTGGTACCGGGAACGAGAAGCTTTGCGGGAAGCCGTTGAGGAGAAGCTGCGATAGTAGTGGCTTGCCTTCCTCGTCATCCTACACGTTACCACCGCTTGATAAGAATCAAGGGTCAGGGCCAGGGTGGGGCATGAAGATTATCCTGTTTCTGTTCTTGGCTGCAGTGGCAGCGCTTGTGTTCGTGTTCGTAAAGGCGCGGCGGAGGAACGATGAGTTCGGGTTGATGGGGAGAATAAACAGTGTGGATTCGATGGTGGACATTCACGTGACGAGTACGAACGGCTACAGGGCGCCGGAGGGAGAGGGGTCGGGAGGGGGAATGGGGGACCTTGTAATGGTGAACGACGAGAGAGGGGTGTTTGGGCTGCAGGATTTGATGAAGGCGTCGGCGGAGGTGCTTGGGAACGGGGGGCTGGGATCGGCGTACAAGGCGGCGATGACGAACGGGCTGTCGGTGGTGGTGAAGAGGATGAGGGATATGAACAAAATGGGAAGGGATGTGTTTGACGCTGAGATGAGGCAGTTTGGGAGGATGAGGCATAAGAATATATTGGGGCCTTTGGCTTACCATTACCGTCGGGAGGAGAAGCTCTTCGTTACTGAGTATATGCCCAAAGGCAGCTTGCTTTATGTCTTGCATGGTGACAGAGGAACAGCCCATGCAGAGTTGAACTGGCCGACCAGGTTAAAGATTGTGAAGGGAATAGCAAGAGGGTTGTCATACCTCTACACTCAATTTTCCACCTATGACCTTCCCCATGGAAACCTCAAGTCCAGCAATGTCCTCCTCAGTGATGACTATGAGCCTCTCTTAGGTGACTTCGGATTCCACCCACTCATCAACCCCACGGCCGCCGTTCAAGCCATGTTCGCCTACAAATCCCCTGACTATATTCAGTACCAAAAGGTCTCCCAGAAGACCGACGTCTACTGCCTCGGTGTCCTCATCCTCGAGATCATTACCGGCAAGTTCCCTTCCCAGTATCATAGCAATGGAAAGGGTGGCACTGATGTTGTTCAACGGGTATTCACGGCGATTTCCGAGTCCAGGGAAGAAGAACTCATCGATCCAGAGTTGCAAGGGAACATGGGATCGCAAACTCAGATGTTGCAGCTTATCCACATTGGTGCTGATTGCACCGAGAGCAATCCTGACAAAAGACTTGCCATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTGTAA 1875 0.5248 MAAVRSNNHNRRSHVFYVFLFIAVSLYSLPLSLSGDAESLQKLKQSFTNGDRVLYTWEPNTSPCENWMGLMCVDGMVMGIRLSDMGLSGTINIDALAEIPGLRTLSFTNNSFTGPIPDFSRLGAIKVLLLSYNQFSGPIPSDFFSKLTSLKKVWIDSNNFSGQIPESLMELALLKELHIENNHFTGRIPAVKEDLTSFNASYNNLEGPIPEALARFGENAFAGTGNEKLCGKPLRRSCDSSGLPSSSSYTLPPLDKNQGSGPGWGMKIILFLFLAAVAALVFVFVKARRRNDEFGLMGRINSVDSMVDIHVTSTNGYRAPEGEGSGGGMGDLVMVNDERGVFGLQDLMKASAEVLGNGGLGSAYKAAMTNGLSVVVKRMRDMNKMGRDVFDAEMRQFGRMRHKNILGPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTAHAELNWPTRLKIVKGIARGLSYLYTQFSTYDLPHGNLKSSNVLLSDDYEPLLGDFGFHPLINPTAAVQAMFAYKSPDYIQYQKVSQKTDVYCLGVLILEIITGKFPSQYHSNGKGGTDVVQRVFTAISESREEELIDPELQGNMGSQTQMLQLIHIGADCTESNPDKRLAMKEAIRRIEEVQV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1458 624 PANTHER LRR RECEPTOR-LIKE KINASE 13 624 - -
Amo03g1458 624 ProSiteProfiles Protein kinase domain profile. 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1458 624 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 624 - -
Amo03g1458 624 Gene3D Transferase(Phosphotransferase) domain 1 426 624 - -
Amo03g1458 624 Gene3D Ribonuclease Inhibitor 35 144 IPR032675 -
Amo03g1458 624 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Amo03g1458 624 Pfam Protein kinase domain 353 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1458 624 Gene3D Phosphorylase Kinase; domain 1 355 425 - -
Amo03g1458 624 SUPERFAMILY L domain-like 35 216 - -
Amo03g1458 624 Gene3D Ribonuclease Inhibitor 145 240 IPR032675 -
Amo03g1458 624 SUPERFAMILY Protein kinase-like (PK-like) 353 619 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1458 Amo-Chr3 37385901 37388130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1458 15 624 Receptor kinase-like Gene Family AT3G42880 48.362 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo03g1458 Pkinase 5.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1458 - - ahf:112738359 1160.59